4EFR

Bombyx mori lipoprotein 7 (crystal form II) at 2.50 A resolution

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Protein Modification Annotation

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	30K Lipoprotein C-terminal domain-like	8055951	3002324	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	30K Lipoprotein N-terminal domain-like	8055952	3002325	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	30K Lipoprotein C-terminal domain-like	8055951	3002324	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	30K Lipoprotein N-terminal domain-like	8055952	3002325	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	30K Lipoprotein N-terminal domain-like	8055952	3002325	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	30K Lipoprotein C-terminal domain-like	8055951	3002324	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	30K Lipoprotein N-terminal domain-like	8055952	3002325	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	30K Lipoprotein C-terminal domain-like	8055951	3002324	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	PF03260	e4efrA1	A: beta duplicates or obligate multimers	X: beta-Trefoil (From Topology)	H: beta-Trefoil (From Topology)	T: beta-Trefoil	F: PF03260	ECOD (1.6)
A	PF03260	e4efrA2	A: alpha superhelices	X: Repetitive alpha hairpins	H: ARM repeat (From Topology)	T: ARM repeat	F: PF03260	ECOD (1.6)
B	PF03260	e4efrB1	A: beta duplicates or obligate multimers	X: beta-Trefoil (From Topology)	H: beta-Trefoil (From Topology)	T: beta-Trefoil	F: PF03260	ECOD (1.6)
B	PF03260	e4efrB2	A: alpha superhelices	X: Repetitive alpha hairpins	H: ARM repeat (From Topology)	T: ARM repeat	F: PF03260	ECOD (1.6)
C	PF03260	e4efrC2	A: beta duplicates or obligate multimers	X: beta-Trefoil (From Topology)	H: beta-Trefoil (From Topology)	T: beta-Trefoil	F: PF03260	ECOD (1.6)
C	PF03260	e4efrC1	A: alpha superhelices	X: Repetitive alpha hairpins	H: ARM repeat (From Topology)	T: ARM repeat	F: PF03260	ECOD (1.6)
D	PF03260	e4efrD2	A: beta duplicates or obligate multimers	X: beta-Trefoil (From Topology)	H: beta-Trefoil (From Topology)	T: beta-Trefoil	F: PF03260	ECOD (1.6)
D	PF03260	e4efrD1	A: alpha superhelices	X: Repetitive alpha hairpins	H: ARM repeat (From Topology)	T: ARM repeat	F: PF03260	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	2.80.10.50	Mainly Beta	Trefoil	Trefoil (Acidic Fibroblast Growth Factor, subunit A)		CATH (utative)
A	1.10.10.2400	Mainly Alpha	Orthogonal Bundle	Arc Repressor Mutant, subunit A	Lepidopteran low molecular weight (30 kD) lipoprotein, N-terminal domain	CATH (utative)
B	2.80.10.50	Mainly Beta	Trefoil	Trefoil (Acidic Fibroblast Growth Factor, subunit A)		CATH (utative)
B	1.10.10.2400	Mainly Alpha	Orthogonal Bundle	Arc Repressor Mutant, subunit A	Lepidopteran low molecular weight (30 kD) lipoprotein, N-terminal domain	CATH (utative)
C	2.80.10.50	Mainly Beta	Trefoil	Trefoil (Acidic Fibroblast Growth Factor, subunit A)		CATH (utative)
C	1.10.10.2400	Mainly Alpha	Orthogonal Bundle	Arc Repressor Mutant, subunit A	Lepidopteran low molecular weight (30 kD) lipoprotein, N-terminal domain	CATH (utative)
D	2.80.10.50	Mainly Beta	Trefoil	Trefoil (Acidic Fibroblast Growth Factor, subunit A)		CATH (utative)
D	1.10.10.2400	Mainly Alpha	Orthogonal Bundle	Arc Repressor Mutant, subunit A	Lepidopteran low molecular weight (30 kD) lipoprotein, N-terminal domain	CATH (utative)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D	PF03260	Lepidopteran low molecular weight (30 kD) lipoprotein (Lipoprotein_11)	Lepidopteran low molecular weight (30 kD) lipoprotein	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	30kDa protein	-	-	extracellular region cellular anatomical entity

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR004943	Lepidopteran low molecular weight lipoprotein	Family
A, B, C, D	IPR042046	Lepidopteran low molecular weight lipoprotein, N-terminal domain	Homologous Superfamily

Protein Modification Annotation

Modified Residue(s)
Chain	Residue(s)	Description
A, B, C, D	0AF	Parent Component: TRP RESID: AA0520 PSI-MOD : 7'-hydroxy-L-tryptophan MOD:01664

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.