4A1R | pdb_00004a1r

The Structure of Serratia marcescens Lip, a membrane bound component of the Type VI Secretion System.

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
DSCOP2 FamilyT6SS-like 8047929 4005882 SCOP2 (2022-06-29)
DSCOP2 SuperfamilyType VI secretion lipoproteins 8052058 3002089 SCOP2 (2022-06-29)
CSCOP2B SuperfamilyType VI secretion lipoproteins 8052058 3002089 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyType VI secretion lipoproteins 8052058 3002089 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyType VI secretion lipoproteins 8052058 3002089 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
DIon_trans_2e4a1rD1 A: a/b three-layered sandwichesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF: Ion_trans_2ECOD (v294.1)
CIon_trans_2e4a1rC1 A: a/b three-layered sandwichesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF: Ion_trans_2ECOD (v294.1)
BIon_trans_2e4a1rB1 A: a/b three-layered sandwichesX: Lipocalins/StreptavidinH: Zn-dependent exopeptidasesT: Zn-dependent exopeptidasesF: Ion_trans_2ECOD (v294.1)
AATP-synt_Fe4a1rA1 A: a/b three-layered sandwichesX: Cystatin-likeH: Cystatin/monellinT: Cystatin/monellinF: ATP-synt_FECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
D2.60.40.4150 Mainly Beta Sandwich Immunoglobulin-like Type VI secretion system, lipoprotein SciNCATH (4.3.0)
C2.60.40.4150 Mainly Beta Sandwich Immunoglobulin-like Type VI secretion system, lipoprotein SciNCATH (4.3.0)
B2.60.40.4150 Mainly Beta Sandwich Immunoglobulin-like Type VI secretion system, lipoprotein SciNCATH (4.3.0)
A2.60.40.4150 Mainly Beta Sandwich Immunoglobulin-like Type VI secretion system, lipoprotein SciNCATH (4.3.0)

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D
IPR017734Type VI secretion system, lipoprotein SciNFamily
A, B, C, D
IPR038706Type VI secretion protein SciN-like superfamilyHomologous Superfamily