4ZWT | pdb_00004zwt

Crystal Structure of the Bacteriophage T4 recombination mediator protein UvsY, Lattice Type IV

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
N	SCOP2B Superfamily	Recombination mediator protein UvsY-like	8091415	3002507	SCOP2B (2022-06-29)
M	SCOP2B Superfamily	Recombination mediator protein UvsY-like	8091415	3002507	SCOP2B (2022-06-29)
L	SCOP2B Superfamily	Recombination mediator protein UvsY-like	8091415	3002507	SCOP2B (2022-06-29)
K	SCOP2B Superfamily	Recombination mediator protein UvsY-like	8091415	3002507	SCOP2B (2022-06-29)
J	SCOP2B Superfamily	Recombination mediator protein UvsY-like	8091415	3002507	SCOP2B (2022-06-29)
I	SCOP2B Superfamily	Recombination mediator protein UvsY-like	8091415	3002507	SCOP2B (2022-06-29)
H	SCOP2B Superfamily	Recombination mediator protein UvsY-like	8091415	3002507	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	Recombination mediator protein UvsY-like	8091415	3002507	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	Recombination mediator protein UvsY-like	8091415	3002507	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	Recombination mediator protein UvsY-like	8091415	3002507	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Recombination mediator protein UvsY-like	8091415	3002507	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Recombination mediator protein UvsY-like	8091415	3002507	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Recombination mediator protein UvsY-like	8091415	3002507	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Recombination mediator protein UvsY-like	8091415	3002507	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
N	UvsY	e4zwtN1	A: alpha bundles	X: Spectrin repeat-like	H: Recombination protein uvsY (From Topology)	T: Recombination protein uvsY	F: UvsY	ECOD (1.6)
M	UvsY	e4zwtM1	A: alpha bundles	X: Spectrin repeat-like	H: Recombination protein uvsY (From Topology)	T: Recombination protein uvsY	F: UvsY	ECOD (1.6)
L	UvsY	e4zwtL1	A: alpha bundles	X: Spectrin repeat-like	H: Recombination protein uvsY (From Topology)	T: Recombination protein uvsY	F: UvsY	ECOD (1.6)
K	UvsY	e4zwtK1	A: alpha bundles	X: Spectrin repeat-like	H: Recombination protein uvsY (From Topology)	T: Recombination protein uvsY	F: UvsY	ECOD (1.6)
J	UvsY	e4zwtJ1	A: alpha bundles	X: Spectrin repeat-like	H: Recombination protein uvsY (From Topology)	T: Recombination protein uvsY	F: UvsY	ECOD (1.6)
I	UvsY	e4zwtI1	A: alpha bundles	X: Spectrin repeat-like	H: Recombination protein uvsY (From Topology)	T: Recombination protein uvsY	F: UvsY	ECOD (1.6)
H	UvsY	e4zwtH1	A: alpha bundles	X: Spectrin repeat-like	H: Recombination protein uvsY (From Topology)	T: Recombination protein uvsY	F: UvsY	ECOD (1.6)
G	UvsY	e4zwtG1	A: alpha bundles	X: Spectrin repeat-like	H: Recombination protein uvsY (From Topology)	T: Recombination protein uvsY	F: UvsY	ECOD (1.6)
F	UvsY	e4zwtF1	A: alpha bundles	X: Spectrin repeat-like	H: Recombination protein uvsY (From Topology)	T: Recombination protein uvsY	F: UvsY	ECOD (1.6)
E	UvsY	e4zwtE1	A: alpha bundles	X: Spectrin repeat-like	H: Recombination protein uvsY (From Topology)	T: Recombination protein uvsY	F: UvsY	ECOD (1.6)
D	UvsY	e4zwtD1	A: alpha bundles	X: Spectrin repeat-like	H: Recombination protein uvsY (From Topology)	T: Recombination protein uvsY	F: UvsY	ECOD (1.6)
C	UvsY	e4zwtC1	A: alpha bundles	X: Spectrin repeat-like	H: Recombination protein uvsY (From Topology)	T: Recombination protein uvsY	F: UvsY	ECOD (1.6)
B	UvsY	e4zwtB1	A: alpha bundles	X: Spectrin repeat-like	H: Recombination protein uvsY (From Topology)	T: Recombination protein uvsY	F: UvsY	ECOD (1.6)
A	UvsY	e4zwtA1	A: alpha bundles	X: Spectrin repeat-like	H: Recombination protein uvsY (From Topology)	T: Recombination protein uvsY	F: UvsY	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N	PF11056	Recombination, repair and ssDNA binding protein UvsY (UvsY)	Recombination, repair and ssDNA binding protein UvsY	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N	Recombination protein uvsY	DNA binding binding nucleic acid binding	primary metabolic process DNA metabolic process nucleobase-containing compound biosynthetic process macromolecule biosynthetic process nucleic acid metabolic process nucleobase-containing compound metabolic process nucleic acid biosynthetic process biosynthetic process metabolic process cellular process macromolecule metabolic process DNA biosynthetic process DNA recombination	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N	IPR021289	Recombination, repair and ssDNA binding protein UvsY	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.