4Z10

Inactive aurone synthase (polyphenol oxidase) co-crystallized with 1,4-resorcinol

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d4z10a_	All alpha proteins	Di-copper centre-containing domain	Di-copper centre-containing domain	automated matches	automated matches	(Coreopsis grandiflora ) [TaxId: 13449 ],	SCOPe (2.08)
E [auth C]	d4z10c_	All alpha proteins	Di-copper centre-containing domain	Di-copper centre-containing domain	automated matches	automated matches	(Coreopsis grandiflora ) [TaxId: 13449 ],	SCOPe (2.08)
G [auth D]	d4z10d_	All alpha proteins	Di-copper centre-containing domain	Di-copper centre-containing domain	automated matches	automated matches	(Coreopsis grandiflora ) [TaxId: 13449 ],	SCOPe (2.08)
I [auth E]	d4z10e_	All alpha proteins	Di-copper centre-containing domain	Di-copper centre-containing domain	automated matches	automated matches	(Coreopsis grandiflora ) [TaxId: 13449 ],	SCOPe (2.08)
C [auth B]	d4z10b_	All alpha proteins	Di-copper centre-containing domain	Di-copper centre-containing domain	automated matches	automated matches	(Coreopsis grandiflora ) [TaxId: 13449 ],	SCOPe (2.08)
K [auth F]	d4z10f_	All alpha proteins	Di-copper centre-containing domain	Di-copper centre-containing domain	automated matches	automated matches	(Coreopsis grandiflora ) [TaxId: 13449 ],	SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	PF00264,PF12142	e4z10A1	A: alpha arrays	X: Di-copper centre-containing domain (From Topology)	H: Di-copper centre-containing domain (From Topology)	T: Di-copper centre-containing domain	F: PF00264,PF12142	ECOD (1.6)
E [auth C]	PF00264,PF12142	e4z10C1	A: alpha arrays	X: Di-copper centre-containing domain (From Topology)	H: Di-copper centre-containing domain (From Topology)	T: Di-copper centre-containing domain	F: PF00264,PF12142	ECOD (1.6)
G [auth D]	PF00264,PF12142	e4z10D1	A: alpha arrays	X: Di-copper centre-containing domain (From Topology)	H: Di-copper centre-containing domain (From Topology)	T: Di-copper centre-containing domain	F: PF00264,PF12142	ECOD (1.6)
I [auth E]	PF00264,PF12142	e4z10E1	A: alpha arrays	X: Di-copper centre-containing domain (From Topology)	H: Di-copper centre-containing domain (From Topology)	T: Di-copper centre-containing domain	F: PF00264,PF12142	ECOD (1.6)
C [auth B]	PF00264,PF12142	e4z10B1	A: alpha arrays	X: Di-copper centre-containing domain (From Topology)	H: Di-copper centre-containing domain (From Topology)	T: Di-copper centre-containing domain	F: PF00264,PF12142	ECOD (1.6)
K [auth F]	PF00264,PF12142	e4z10F1	A: alpha arrays	X: Di-copper centre-containing domain (From Topology)	H: Di-copper centre-containing domain (From Topology)	T: Di-copper centre-containing domain	F: PF00264,PF12142	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	1.10.1280.10	Mainly Alpha	Orthogonal Bundle	di-copper center containing domain from catechol oxidase	Di-copper center containing domain from catechol oxidase	CATH (4.3.0)
E [auth C]	1.10.1280.10	Mainly Alpha	Orthogonal Bundle	di-copper center containing domain from catechol oxidase	Di-copper center containing domain from catechol oxidase	CATH (4.3.0)
G [auth D]	1.10.1280.10	Mainly Alpha	Orthogonal Bundle	di-copper center containing domain from catechol oxidase	Di-copper center containing domain from catechol oxidase	CATH (4.3.0)
I [auth E]	1.10.1280.10	Mainly Alpha	Orthogonal Bundle	di-copper center containing domain from catechol oxidase	Di-copper center containing domain from catechol oxidase	CATH (4.3.0)
C [auth B]	1.10.1280.10	Mainly Alpha	Orthogonal Bundle	di-copper center containing domain from catechol oxidase	Di-copper center containing domain from catechol oxidase	CATH (4.3.0)
K [auth F]	1.10.1280.10	Mainly Alpha	Orthogonal Bundle	di-copper center containing domain from catechol oxidase	Di-copper center containing domain from catechol oxidase	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, C [auth B], E [auth C], G [auth D], I [auth E], A, C [auth B], E [auth C], G [auth D], I [auth E], K [auth F]	PF12142	Polyphenol oxidase middle domain (PPO1_DWL)	Polyphenol oxidase middle domain	This domain family is found in bacteria and eukaryotes, and is approximately 50 amino acids in length, and the family is found in association with Pfam:PF00264. Most members are annotated as being polyphenol oxidases, and many are from plants or plas ...	This domain family is found in bacteria and eukaryotes, and is approximately 50 amino acids in length, and the family is found in association with Pfam:PF00264. Most members are annotated as being polyphenol oxidases, and many are from plants or plastids. There is a conserved DWL sequence motif which gives the family its name.	Domain
A, C [auth B], E [auth C], G [auth D], I [auth E], A, C [auth B], E [auth C], G [auth D], I [auth E], K [auth F]	PF00264	Common central domain of tyrosinase (Tyrosinase)	Common central domain of tyrosinase	This family also contains polyphenol oxidases and some hemocyanins. Binds two copper ions via two sets of three histidines. This family is related to Pfam:PF00372.	Domain
B [auth G], D [auth H], F [auth I], H [auth J], J [auth K], B [auth G], D [auth H], F [auth I], H [auth J], J [auth K], L	PF12143	Protein of unknown function (DUF_B2219) (PPO1_KFDV)	Protein of unknown function (DUF_B2219)	This domain family is found in eukaryotes, and is typically between 138 and 152 amino acids in length. and the family is found in association with Pfam:PF00264. Many members are plant or plastid polyphenol oxidases, and there is a highly conserved se ...	This domain family is found in eukaryotes, and is typically between 138 and 152 amino acids in length. and the family is found in association with Pfam:PF00264. Many members are plant or plastid polyphenol oxidases, and there is a highly conserved sequence motif: KFDV, from which the name derives. This is the C-terminal domain of these oxidases.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, C [auth B], E [auth C], G [auth D], I [auth E], A, C [auth B], E [auth C], G [auth D], I [auth E], K [auth F]	Aurone synthase	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor oxidoreductase activity monooxygenase activity oxidoreductase activity, acting on diphenols and related substances as donors catechol oxidase activity catalytic activity cation binding ion binding binding metal ion binding small molecule binding	pigment metabolic process pigment biosynthetic process metabolic process	-
B [auth G], D [auth H], F [auth I], H [auth J], J [auth K], B [auth G], D [auth H], F [auth I], H [auth J], J [auth K], L	Aurone synthase	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor oxidoreductase activity monooxygenase activity oxidoreductase activity, acting on diphenols and related substances as donors catechol oxidase activity catalytic activity cation binding ion binding binding metal ion binding small molecule binding	pigment metabolic process pigment biosynthetic process metabolic process	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, C [auth B], E [auth C], G [auth D], I [auth E], A, C [auth B], E [auth C], G [auth D], I [auth E], K [auth F]	IPR022739	Polyphenol oxidase, central domain	Domain
A, C [auth B], E [auth C], G [auth D], I [auth E], A, C [auth B], E [auth C], G [auth D], I [auth E], K [auth F]	IPR008922	Di-copper centre-containing domain superfamily	Homologous Superfamily
A, C [auth B], E [auth C], G [auth D], I [auth E], A, C [auth B], E [auth C], G [auth D], I [auth E], K [auth F]	IPR016213	Polyphenol oxidase	Family
A, C [auth B], E [auth C], G [auth D], I [auth E], A, C [auth B], E [auth C], G [auth D], I [auth E], K [auth F]	IPR022740	Polyphenol oxidase, C-terminal	Domain
A, C [auth B], E [auth C], G [auth D], I [auth E], A, C [auth B], E [auth C], G [auth D], I [auth E], K [auth F]	IPR002227	Tyrosinase copper-binding domain	Domain
B [auth G], D [auth H], F [auth I], H [auth J], J [auth K], B [auth G], D [auth H], F [auth I], H [auth J], J [auth K], L	IPR022739	Polyphenol oxidase, central domain	Domain
B [auth G], D [auth H], F [auth I], H [auth J], J [auth K], B [auth G], D [auth H], F [auth I], H [auth J], J [auth K], L	IPR008922	Di-copper centre-containing domain superfamily	Homologous Superfamily
B [auth G], D [auth H], F [auth I], H [auth J], J [auth K], B [auth G], D [auth H], F [auth I], H [auth J], J [auth K], L	IPR016213	Polyphenol oxidase	Family
B [auth G], D [auth H], F [auth I], H [auth J], J [auth K], B [auth G], D [auth H], F [auth I], H [auth J], J [auth K], L	IPR022740	Polyphenol oxidase, C-terminal	Domain
B [auth G], D [auth H], F [auth I], H [auth J], J [auth K], B [auth G], D [auth H], F [auth I], H [auth J], J [auth K], L	IPR002227	Tyrosinase copper-binding domain	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.