4YJL
Crystal structure of APC-ARM in complexed with Amer1-A2
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | ARM repeat-like | 8053357 | 3000116 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | ARM repeat-like | 8053357 | 3000116 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | ARM repeat-like | 8053357 | 3000116 | SCOP2B (2022-06-29) |
E | SCOP2B Superfamily | ARM repeat-like | 8053357 | 3000116 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | ARM repeat-like | 8053357 | 3000116 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | ARM repeat-like | 8053357 | 3000116 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00514,PF18797 | e4yjlA1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: PF00514,PF18797 | ECOD (1.6) |
C | PF00514,PF18797 | e4yjlC1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: PF00514,PF18797 | ECOD (1.6) |
D | PF00514,PF18797 | e4yjlD1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: PF00514,PF18797 | ECOD (1.6) |
E | PF00514,PF18797 | e4yjlE1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: PF00514,PF18797 | ECOD (1.6) |
F | PF00514,PF18797 | e4yjlF1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: PF00514,PF18797 | ECOD (1.6) |
B | PF00514,PF18797 | e4yjlB1 | A: alpha superhelices | X: Repetitive alpha hairpins | H: ARM repeat (From Topology) | T: ARM repeat | F: PF00514,PF18797 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.25.10.10 | Mainly Alpha | Alpha Horseshoe | Leucine-rich Repeat Variant | Leucine-rich Repeat Variant | CATH (4.3.0) |
C | 1.25.10.10 | Mainly Alpha | Alpha Horseshoe | Leucine-rich Repeat Variant | Leucine-rich Repeat Variant | CATH (4.3.0) |
D | 1.25.10.10 | Mainly Alpha | Alpha Horseshoe | Leucine-rich Repeat Variant | Leucine-rich Repeat Variant | CATH (4.3.0) |
E | 1.25.10.10 | Mainly Alpha | Alpha Horseshoe | Leucine-rich Repeat Variant | Leucine-rich Repeat Variant | CATH (4.3.0) |
F | 1.25.10.10 | Mainly Alpha | Alpha Horseshoe | Leucine-rich Repeat Variant | Leucine-rich Repeat Variant | CATH (4.3.0) |
B | 1.25.10.10 | Mainly Alpha | Alpha Horseshoe | Leucine-rich Repeat Variant | Leucine-rich Repeat Variant | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00514 | Armadillo/beta-catenin-like repeat (Arm) | Armadillo/beta-catenin-like repeat | - | Repeat | |
PF16629 | Armadillo-associated region on APC (Arm_APC_u3) | Armadillo-associated region on APC | - | Disordered | |
PF18797 | Adenomatous polyposis coli (APC) repeat (APC_rep) | Adenomatous polyposis coli (APC) repeat | - | Repeat | |
PF09422 | APC membrane recruitment protein (AMER) | APC membrane recruitment protein | - | Disordered |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR016024 | Armadillo-type fold | Homologous Superfamily | |
IPR009240 | Adenomatous polyposis coli protein, 15 residue repeat | Repeat | |
IPR009232 | EB-1 binding | Domain | |
IPR000225 | Armadillo | Repeat | |
IPR009223 | Adenomatous polyposis coli protein repeat | Repeat | |
IPR026818 | Adenomatous polyposis coli (APC) family | Family | |
IPR036149 | APC, N-terminal coiled-coil domain superfamily | Homologous Superfamily | |
IPR009224 | SAMP | Repeat | |
IPR011989 | Armadillo-like helical | Homologous Superfamily | |
IPR041257 | Adenomatous polyposis coli (APC) repeat | Repeat | |
IPR026831 | Adenomatous polyposis coli protein | Homologous Superfamily | |
IPR009234 | Adenomatous polyposis coli protein basic domain | Domain | |
IPR032038 | Adenomatous polyposis coli, N-terminal dimerisation domain | Domain | |
IPR019003 | APC membrane recruitment protein | Family |