4Y5S | pdb_00004y5s

Structure of FtmOx1 with a-Ketoglutarate as co-substrate

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BLip_Ce4y5sB1 A: a/b three-layered sandwichesX: P-loop domains-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Lip_CECOD (v294.1)
ALip_Ce4y5sA1 A: a/b three-layered sandwichesX: P-loop domains-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Lip_CECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B2.60.120.620 Mainly Beta Sandwich Jelly Rolls q2cbj1_9rhob like domainCATH (4.3.0)
A2.60.120.620 Mainly Beta Sandwich Jelly Rolls q2cbj1_9rhob like domainCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF05721Phytanoyl-CoA dioxygenase (PhyH) (PhyH)Phytanoyl-CoA dioxygenase (PhyH)This family is made up of several eukaryotic phytanoyl-CoA dioxygenase (PhyH) proteins, ectoine hydroxylases and a number of bacterial deoxygenases. PhyH is a peroxisomal enzyme catalysing the first step of phytanic acid alpha-oxidation. PhyH deficie ...This family is made up of several eukaryotic phytanoyl-CoA dioxygenase (PhyH) proteins, ectoine hydroxylases and a number of bacterial deoxygenases. PhyH is a peroxisomal enzyme catalysing the first step of phytanic acid alpha-oxidation. PhyH deficiency causes Refsum's disease (RD) which is an inherited neurological syndrome biochemically characterised by the accumulation of phytanic acid in plasma and tissues [1].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
Verruculogen synthase -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR008775Phytanoyl-CoA dioxygenase-likeFamily