4XYQ | pdb_00004xyq

Structure of AgrA LytTR domain in complex with promoters

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
C [auth A]SCOP2B SuperfamilyChromo domain-like 8092313 3000161 SCOP2B (2022-06-29)
C [auth A]SCOP2B SuperfamilyChromo domain-like 8092314 3000161 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
C [auth A]BAHe4xyqA1 A: a/b three-layered sandwichesX: Alpha-beta plaitsH: SH3T: SH3F: BAHECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
C [auth A]2.40.50.1020 Mainly Beta Beta Barrel OB fold (Dihydrolipoamide Acetyltransferase, E2P) LytTr DNA-binding domainCATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
C [auth A]Accessory gene regulator A -
B [auth C]DNA (5'-D(*AP*AP*TP*AP*CP*TP*TP*AP*AP*CP*TP*GP*TP*TP*AP*A)-3')---
A [auth B]DNA (5'-D(*TP*TP*TP*AP*AP*CP*AP*GP*TP*TP*AP*AP*GP*TP*AP*T)-3')---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
C [auth A]IPR011006CheY-like superfamilyHomologous Superfamily
C [auth A]IPR001789Signal transduction response regulator, receiver domainDomain
C [auth A]IPR007492LytTR DNA-binding domainDomain
C [auth A]IPR046947Transcriptional regulatory protein LytR-likeFamily