4XWW | pdb_00004xww

Crystal structure of RNase J complexed with RNA


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BLactamase_B_6_1e4xwwB2 A: a+b four layersX: Metallo-hydrolase/oxidoreductase (From Topology)H: Metallo-hydrolase/oxidoreductase (From Topology)T: Metallo-hydrolase/oxidoreductaseF: Lactamase_B_6_1ECOD (1.6)
BRnjAe4xwwB3 A: a+b complex topologyX: Flagellar protein FlgA N-terminal domain-likeH: RNase J C-terminal domain (From Topology)T: RNase J C-terminal domainF: RnjAECOD (1.6)
BMG423e4xwwB1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: MG423ECOD (1.6)
ALactamase_B_6_1e4xwwA1 A: a+b four layersX: Metallo-hydrolase/oxidoreductase (From Topology)H: Metallo-hydrolase/oxidoreductase (From Topology)T: Metallo-hydrolase/oxidoreductaseF: Lactamase_B_6_1ECOD (1.6)
ARnjAe4xwwA3 A: a+b complex topologyX: Flagellar protein FlgA N-terminal domain-likeH: RNase J C-terminal domain (From Topology)T: RNase J C-terminal domainF: RnjAECOD (1.6)
AMG423e4xwwA2 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: MG423ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B3.60.15.10 Alpha Beta 4-Layer Sandwich Metallo-beta-lactamase Chain ACATH (4.2.0)
B3.40.50.10710 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Metallo-hydrolase/oxidoreductaseCATH (4.2.0)
B3.10.20.580 Alpha Beta Roll Ubiquitin-like (UB roll) CATH (4.2.0)
A3.60.15.10 Alpha Beta 4-Layer Sandwich Metallo-beta-lactamase Chain ACATH (4.2.0)
A3.40.50.10710 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Metallo-hydrolase/oxidoreductaseCATH (4.2.0)
A3.10.20.580 Alpha Beta Roll Ubiquitin-like (UB roll) CATH (4.2.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
C [auth D],
D [auth E]
RNA (5'-D(UP*UP*UP*UP*UP*UP*U)-3')---
A, B
DR2417