4WWU
Structure of Mex67:Mtr2
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
E | SCOP2B Superfamily | NTF2-like | 8034031 | 3000472 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | NTF2-like | 8034031 | 3000472 | SCOP2B (2022-06-29) |
H | SCOP2B Superfamily | NTF2-like | 8034031 | 3000472 | SCOP2B (2022-06-29) |
K | SCOP2B Superfamily | NTF2-like | 8034031 | 3000472 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | NTF2-like | 8034032 | 3000472 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | NTF2-like | 8034032 | 3000472 | SCOP2B (2022-06-29) |
I | SCOP2B Superfamily | NTF2-like | 8034032 | 3000472 | SCOP2B (2022-06-29) |
L | SCOP2B Superfamily | NTF2-like | 8034032 | 3000472 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
D | PF18444 | e4wwuD1 | A: a+b two layers | X: Alpha-beta plaits | H: RNA-binding domain, RBD (From Topology) | T: RNA-binding domain, RBD | F: PF18444 | ECOD (1.6) |
E | F_UNCLASSIFIED | e4wwuE2 | A: beta duplicates or obligate multimers | X: Single-stranded right-handed beta-helix | H: Leucine-rich repeats (From Topology) | T: Leucine-rich repeats | F: F_UNCLASSIFIED | ECOD (1.6) |
E | PF22602 | e4wwuE1 | A: a+b two layers | X: Cystatin-like | H: NTF2-like (From Topology) | T: NTF2-like | F: PF22602 | ECOD (1.6) |
A | PF18444 | e4wwuA1 | A: a+b two layers | X: Alpha-beta plaits | H: RNA-binding domain, RBD (From Topology) | T: RNA-binding domain, RBD | F: PF18444 | ECOD (1.6) |
B | F_UNCLASSIFIED | e4wwuB2 | A: beta duplicates or obligate multimers | X: Single-stranded right-handed beta-helix | H: Leucine-rich repeats (From Topology) | T: Leucine-rich repeats | F: F_UNCLASSIFIED | ECOD (1.6) |
B | PF22602 | e4wwuB1 | A: a+b two layers | X: Cystatin-like | H: NTF2-like (From Topology) | T: NTF2-like | F: PF22602 | ECOD (1.6) |
G | PF18444 | e4wwuG1 | A: a+b two layers | X: Alpha-beta plaits | H: RNA-binding domain, RBD (From Topology) | T: RNA-binding domain, RBD | F: PF18444 | ECOD (1.6) |
H | F_UNCLASSIFIED | e4wwuH2 | A: beta duplicates or obligate multimers | X: Single-stranded right-handed beta-helix | H: Leucine-rich repeats (From Topology) | T: Leucine-rich repeats | F: F_UNCLASSIFIED | ECOD (1.6) |
H | PF22602 | e4wwuH1 | A: a+b two layers | X: Cystatin-like | H: NTF2-like (From Topology) | T: NTF2-like | F: PF22602 | ECOD (1.6) |
J | PF18444 | e4wwuJ1 | A: a+b two layers | X: Alpha-beta plaits | H: RNA-binding domain, RBD (From Topology) | T: RNA-binding domain, RBD | F: PF18444 | ECOD (1.6) |
K | F_UNCLASSIFIED | e4wwuK1 | A: beta duplicates or obligate multimers | X: Single-stranded right-handed beta-helix | H: Leucine-rich repeats (From Topology) | T: Leucine-rich repeats | F: F_UNCLASSIFIED | ECOD (1.6) |
K | PF22602 | e4wwuK2 | A: a+b two layers | X: Cystatin-like | H: NTF2-like (From Topology) | T: NTF2-like | F: PF22602 | ECOD (1.6) |
C | PF10429 | e4wwuC1 | A: a+b two layers | X: Cystatin-like | H: NTF2-like (From Topology) | T: NTF2-like | F: PF10429 | ECOD (1.6) |
F | PF10429 | e4wwuF1 | A: a+b two layers | X: Cystatin-like | H: NTF2-like (From Topology) | T: NTF2-like | F: PF10429 | ECOD (1.6) |
I | PF10429 | e4wwuI1 | A: a+b two layers | X: Cystatin-like | H: NTF2-like (From Topology) | T: NTF2-like | F: PF10429 | ECOD (1.6) |
L | PF10429 | e4wwuL1 | A: a+b two layers | X: Cystatin-like | H: NTF2-like (From Topology) | T: NTF2-like | F: PF10429 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF18444 | RNA recognition motif (RRM_9) | RNA recognition motif | The Mex67-Mtr2 complex (TAP-p15 or NXF1-NXT1 in metazoans) is the principal mRNA export factor in Saccharomyces cerevisiae. Mex67 is a member of the NXF family of proteins and has conserved homologs through eukaryotes from yeast to humans. Although s ... | Domain | |
PF10429 | Nuclear pore RNA shuttling protein Mtr2 (Mtr2) | Nuclear pore RNA shuttling protein Mtr2 | Mtr2 is a monomeric, dual-action, RNA-shuttle protein found in yeasts. Transport across the nuclear-cytoplasmic membrane is via the macro-molecular membrane-spanning nuclear pore complex, NPC. The pore is lined by a subset of NPC members called nucle ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR030217 | Nuclear RNA export factor | Family | |
IPR032710 | NTF2-like domain superfamily | Homologous Superfamily | |
IPR001611 | Leucine-rich repeat | Repeat | |
IPR018222 | Nuclear transport factor 2, eukaryote | Domain | |
IPR032675 | Leucine-rich repeat domain superfamily | Homologous Superfamily | |
IPR040736 | Mex67, RNA recognition motif | Domain | |
IPR009060 | UBA-like superfamily | Homologous Superfamily | |
IPR005637 | TAP C-terminal (TAP-C) domain | Domain | |
IPR032710 | NTF2-like domain superfamily | Homologous Superfamily | |
IPR045875 | Nuclear transport factor 2 | Family | |
IPR019488 | Nuclear pore RNA shuttling protein Mtr2 | Family |