Annotations: 4WNL

The X-ray structure of a RNA-binding protein complex

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
C [auth B]	SCOP2B Superfamily	RNA-binding protein She2p	8043992	3002016	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	RNA-binding protein She2p	8043992	3002016	SCOP2B (2022-06-29)
B [auth A]	SCOP2B Superfamily	RNA-binding protein She2p	8043992	3002016	SCOP2B (2022-06-29)
A [auth C]	SCOP2B Superfamily	RNA-binding protein She2p	8043992	3002016	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
C [auth B]	FCH	e4wnlB1	A: a/b three-layered sandwiches	X: CCHC-type 1 zinc finger	H: Retrovirus zinc finger-related domains	T: Retrovirus zinc finger-related domains	F: FCH	ECOD (v294.1)
D	FCH	e4wnlD1	A: a/b three-layered sandwiches	X: CCHC-type 1 zinc finger	H: Retrovirus zinc finger-related domains	T: Retrovirus zinc finger-related domains	F: FCH	ECOD (v294.1)
B [auth A]	FCH	e4wnlA1	A: a/b three-layered sandwiches	X: CCHC-type 1 zinc finger	H: Retrovirus zinc finger-related domains	T: Retrovirus zinc finger-related domains	F: FCH	ECOD (v294.1)
A [auth C]	FCH	e4wnlC1	A: a/b three-layered sandwiches	X: CCHC-type 1 zinc finger	H: Retrovirus zinc finger-related domains	T: Retrovirus zinc finger-related domains	F: FCH	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
C [auth B]	1.20.200.20	Mainly Alpha	Up-down Bundle	Fumarase C	Chain A, domain 2	CATH (4.3.0)
D	1.20.200.20	Mainly Alpha	Up-down Bundle	Fumarase C	Chain A, domain 2	CATH (4.3.0)
B [auth A]	1.20.200.20	Mainly Alpha	Up-down Bundle	Fumarase C	Chain A, domain 2	CATH (4.3.0)
A [auth C]	1.20.200.20	Mainly Alpha	Up-down Bundle	Fumarase C	Chain A, domain 2	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A [auth C], B [auth A], C [auth B], D	PF11435	RNA binding protein She2p (She2p)	RNA binding protein She2p	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
E, F, G, H	SWI5-dependent HO expression protein 3	RNA binding binding nucleic acid binding	cellular component organization organelle organization organelle inheritance cellular process cellular component organization or biogenesis endoplasmic reticulum inheritance endoplasmic reticulum organization endomembrane system organization RNA transport nitrogen compound transport transport nucleic acid transport mRNA transport establishment of localization cellular component organization organelle organization organelle inheritance cellular process cellular component organization or biogenesis endoplasmic reticulum inheritance endoplasmic reticulum organization endomembrane system organization RNA transport nitrogen compound transport transport nucleic acid transport mRNA transport establishment of localization localization establishment of RNA localization macromolecule localization RNA localization nucleobase-containing compound transport	membrane-bounded organelle intracellular anatomical structure organelle subcompartment membrane intracellular membrane-bounded organelle endomembrane system endoplasmic reticulum subcompartment intracellular organelle cellular anatomical structure organelle nuclear outer membrane-endoplasmic reticulum membrane network endoplasmic reticulum cytoplasm organelle membrane membrane-bounded organelle intracellular anatomical structure organelle subcompartment membrane intracellular membrane-bounded organelle endomembrane system endoplasmic reticulum subcompartment intracellular organelle cellular anatomical structure organelle nuclear outer membrane-endoplasmic reticulum membrane network endoplasmic reticulum cytoplasm organelle membrane endoplasmic reticulum membrane
A [auth C], B [auth A], C [auth B], D	SWI5-dependent HO expression protein 2	RNA binding binding nucleic acid binding mRNA binding lipid binding sequence-specific mRNA binding	localization macromolecule localization intracellular mRNA localization RNA localization RNA transport nitrogen compound transport transport nucleic acid transport mRNA transport establishment of localization establishment of RNA localization nucleobase-containing compound transport developmental process sex determination localization macromolecule localization intracellular mRNA localization RNA localization RNA transport nitrogen compound transport transport nucleic acid transport mRNA transport establishment of localization establishment of RNA localization nucleobase-containing compound transport developmental process sex determination mating type determination reproductive process reproductive process in single-celled organism developmental process involved in reproduction mating type switching	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol cellular bud cellular bud tip site of polarized growth membrane-bounded organelle intracellular organelle organelle nucleus intracellular membrane-bounded organelle

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
E, F, G, H	IPR031398	SWI5-dependent HO expression protein 3	Family
A [auth C], B [auth A], C [auth B], D	IPR036827	She2 domain superfamily	Homologous Superfamily
A [auth C], B [auth A], C [auth B], D	IPR024261	RNA binding protein She2	Domain

RCSB PDB is hosted by

RCSB PDB is a member of

RCSB Partners
Nucleic Acid Knowledgebase

CoreTrustSeal

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.