4V7N | pdb_00004v7n

Glycocyamine kinase, beta-beta homodimer from marine worm Namalycastis sp., with transition state analog Mg(II)-ADP-NO3-glycocyamine.

External Resource: Annotation

Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
Z [auth BH]	Rota_VP4_MID	e4v7nBH1	A: alpha arrays	X: VP4 membrane interaction domain	H: VP4 membrane interaction domain	T: VP4 membrane interaction domain	F: Rota_VP4_MID	ECOD (v295)
Y [auth BG]	Rota_VP4_MID	e4v7nBG1	A: alpha arrays	X: VP4 membrane interaction domain	H: VP4 membrane interaction domain	T: VP4 membrane interaction domain	F: Rota_VP4_MID	ECOD (v295)
X [auth BF]	Rota_VP4_MID	e4v7nBF1	A: alpha arrays	X: VP4 membrane interaction domain	H: VP4 membrane interaction domain	T: VP4 membrane interaction domain	F: Rota_VP4_MID	ECOD (v295)
W [auth BE]	Rota_VP4_MID	e4v7nBE1	A: alpha arrays	X: VP4 membrane interaction domain	H: VP4 membrane interaction domain	T: VP4 membrane interaction domain	F: Rota_VP4_MID	ECOD (v295)
V [auth BD]	Rota_VP4_MID	e4v7nBD1	A: alpha arrays	X: VP4 membrane interaction domain	H: VP4 membrane interaction domain	T: VP4 membrane interaction domain	F: Rota_VP4_MID	ECOD (v295)
U [auth BC]	Rota_VP4_MID	e4v7nBC1	A: alpha arrays	X: VP4 membrane interaction domain	H: VP4 membrane interaction domain	T: VP4 membrane interaction domain	F: Rota_VP4_MID	ECOD (v295)
T [auth BB]	Rota_VP4_MID	e4v7nBB1	A: alpha arrays	X: VP4 membrane interaction domain	H: VP4 membrane interaction domain	T: VP4 membrane interaction domain	F: Rota_VP4_MID	ECOD (v295)
S [auth BA]	Rota_VP4_MID	e4v7nBA1	A: alpha arrays	X: VP4 membrane interaction domain	H: VP4 membrane interaction domain	T: VP4 membrane interaction domain	F: Rota_VP4_MID	ECOD (v295)
R [auth AR]	Rota_VP4_MID	e4v7nAR1	A: alpha arrays	X: VP4 membrane interaction domain	H: VP4 membrane interaction domain	T: VP4 membrane interaction domain	F: Rota_VP4_MID	ECOD (v295)
Q [auth AQ]	Rota_VP4_MID	e4v7nAQ1	A: alpha arrays	X: VP4 membrane interaction domain	H: VP4 membrane interaction domain	T: VP4 membrane interaction domain	F: Rota_VP4_MID	ECOD (v295)
P [auth AP]	Rota_VP4_MID	e4v7nAP1	A: alpha arrays	X: VP4 membrane interaction domain	H: VP4 membrane interaction domain	T: VP4 membrane interaction domain	F: Rota_VP4_MID	ECOD (v295)
O [auth AO]	Rota_VP4_MID	e4v7nAO1	A: alpha arrays	X: VP4 membrane interaction domain	H: VP4 membrane interaction domain	T: VP4 membrane interaction domain	F: Rota_VP4_MID	ECOD (v295)
N [auth AN]	Rota_VP4_MID	e4v7nAN1	A: alpha arrays	X: VP4 membrane interaction domain	H: VP4 membrane interaction domain	T: VP4 membrane interaction domain	F: Rota_VP4_MID	ECOD (v295)
M [auth AM]	Rota_VP4_MID	e4v7nAM1	A: alpha arrays	X: VP4 membrane interaction domain	H: VP4 membrane interaction domain	T: VP4 membrane interaction domain	F: Rota_VP4_MID	ECOD (v295)
L [auth AL]	Rota_VP4_MID	e4v7nAL1	A: alpha arrays	X: VP4 membrane interaction domain	H: VP4 membrane interaction domain	T: VP4 membrane interaction domain	F: Rota_VP4_MID	ECOD (v295)
K [auth AK]	Rota_VP4_MID	e4v7nAK1	A: alpha arrays	X: VP4 membrane interaction domain	H: VP4 membrane interaction domain	T: VP4 membrane interaction domain	F: Rota_VP4_MID	ECOD (v295)
JA [auth BR]	Rota_VP4_MID	e4v7nBR1	A: alpha arrays	X: VP4 membrane interaction domain	H: VP4 membrane interaction domain	T: VP4 membrane interaction domain	F: Rota_VP4_MID	ECOD (v295)
J [auth AJ]	Rota_VP4_MID	e4v7nAJ1	A: alpha arrays	X: VP4 membrane interaction domain	H: VP4 membrane interaction domain	T: VP4 membrane interaction domain	F: Rota_VP4_MID	ECOD (v295)
IA [auth BQ]	Rota_VP4_MID	e4v7nBQ1	A: alpha arrays	X: VP4 membrane interaction domain	H: VP4 membrane interaction domain	T: VP4 membrane interaction domain	F: Rota_VP4_MID	ECOD (v295)
I [auth AI]	Rota_VP4_MID	e4v7nAI1	A: alpha arrays	X: VP4 membrane interaction domain	H: VP4 membrane interaction domain	T: VP4 membrane interaction domain	F: Rota_VP4_MID	ECOD (v295)
HA [auth BP]	Rota_VP4_MID	e4v7nBP1	A: alpha arrays	X: VP4 membrane interaction domain	H: VP4 membrane interaction domain	T: VP4 membrane interaction domain	F: Rota_VP4_MID	ECOD (v295)
H [auth AH]	Rota_VP4_MID	e4v7nAH1	A: alpha arrays	X: VP4 membrane interaction domain	H: VP4 membrane interaction domain	T: VP4 membrane interaction domain	F: Rota_VP4_MID	ECOD (v295)
GA [auth BO]	Rota_VP4_MID	e4v7nBO1	A: alpha arrays	X: VP4 membrane interaction domain	H: VP4 membrane interaction domain	T: VP4 membrane interaction domain	F: Rota_VP4_MID	ECOD (v295)
G [auth AG]	Rota_VP4_MID	e4v7nAG1	A: alpha arrays	X: VP4 membrane interaction domain	H: VP4 membrane interaction domain	T: VP4 membrane interaction domain	F: Rota_VP4_MID	ECOD (v295)
FA [auth BN]	Rota_VP4_MID	e4v7nBN1	A: alpha arrays	X: VP4 membrane interaction domain	H: VP4 membrane interaction domain	T: VP4 membrane interaction domain	F: Rota_VP4_MID	ECOD (v295)
F [auth AF]	Rota_VP4_MID	e4v7nAF1	A: alpha arrays	X: VP4 membrane interaction domain	H: VP4 membrane interaction domain	T: VP4 membrane interaction domain	F: Rota_VP4_MID	ECOD (v295)
EA [auth BM]	Rota_VP4_MID	e4v7nBM1	A: alpha arrays	X: VP4 membrane interaction domain	H: VP4 membrane interaction domain	T: VP4 membrane interaction domain	F: Rota_VP4_MID	ECOD (v295)
E [auth AE]	Rota_VP4_MID	e4v7nAE1	A: alpha arrays	X: VP4 membrane interaction domain	H: VP4 membrane interaction domain	T: VP4 membrane interaction domain	F: Rota_VP4_MID	ECOD (v295)
DA [auth BL]	Rota_VP4_MID	e4v7nBL1	A: alpha arrays	X: VP4 membrane interaction domain	H: VP4 membrane interaction domain	T: VP4 membrane interaction domain	F: Rota_VP4_MID	ECOD (v295)
D [auth AD]	Rota_VP4_MID	e4v7nAD1	A: alpha arrays	X: VP4 membrane interaction domain	H: VP4 membrane interaction domain	T: VP4 membrane interaction domain	F: Rota_VP4_MID	ECOD (v295)
CA [auth BK]	Rota_VP4_MID	e4v7nBK1	A: alpha arrays	X: VP4 membrane interaction domain	H: VP4 membrane interaction domain	T: VP4 membrane interaction domain	F: Rota_VP4_MID	ECOD (v295)
C [auth AC]	Rota_VP4_MID	e4v7nAC1	A: alpha arrays	X: VP4 membrane interaction domain	H: VP4 membrane interaction domain	T: VP4 membrane interaction domain	F: Rota_VP4_MID	ECOD (v295)
BA [auth BJ]	Rota_VP4_MID	e4v7nBJ1	A: alpha arrays	X: VP4 membrane interaction domain	H: VP4 membrane interaction domain	T: VP4 membrane interaction domain	F: Rota_VP4_MID	ECOD (v295)
B [auth AB]	Rota_VP4_MID	e4v7nAB1	A: alpha arrays	X: VP4 membrane interaction domain	H: VP4 membrane interaction domain	T: VP4 membrane interaction domain	F: Rota_VP4_MID	ECOD (v295)
AA [auth BI]	Rota_VP4_MID	e4v7nBI1	A: alpha arrays	X: VP4 membrane interaction domain	H: VP4 membrane interaction domain	T: VP4 membrane interaction domain	F: Rota_VP4_MID	ECOD (v295)
A [auth AA]	Rota_VP4_MID	e4v7nAA1	A: alpha arrays	X: VP4 membrane interaction domain	H: VP4 membrane interaction domain	T: VP4 membrane interaction domain	F: Rota_VP4_MID	ECOD (v295)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth AA], AA [auth BI], B [auth AB], BA [auth BJ], C [auth AC], A [auth AA], AA [auth BI], B [auth AB], BA [auth BJ], C [auth AC], CA [auth BK], D [auth AD], DA [auth BL], E [auth AE], EA [auth BM], F [auth AF], FA [auth BN], G [auth AG], GA [auth BO], H [auth AH], HA [auth BP], I [auth AI], IA [auth BQ], J [auth AJ], JA [auth BR], K [auth AK], L [auth AL], M [auth AM], N [auth AN], O [auth AO], P [auth AP], Q [auth AQ], R [auth AR], S [auth BA], T [auth BB], U [auth BC], V [auth BD], W [auth BE], X [auth BF], Y [auth BG], Z [auth BH]	Glycocyamine kinase beta chain	binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding creatine kinase activity kinase activity transferase activity catalytic activity phosphotransferase activity, nitrogenous group as acceptor transferase activity, transferring phosphorus-containing groups	phosphocreatine metabolic process phosphocreatine biosynthetic process modified amino acid biosynthetic process modified amino acid metabolic process phosphagen biosynthetic process biosynthetic process organophosphate metabolic process organophosphate biosynthetic process metabolic process cellular process phosphorus metabolic process	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth AA], AA [auth BI], B [auth AB], BA [auth BJ], C [auth AC], A [auth AA], AA [auth BI], B [auth AB], BA [auth BJ], C [auth AC], CA [auth BK], D [auth AD], DA [auth BL], E [auth AE], EA [auth BM], F [auth AF], FA [auth BN], G [auth AG], GA [auth BO], H [auth AH], HA [auth BP], I [auth AI], IA [auth BQ], J [auth AJ], JA [auth BR], K [auth AK], L [auth AL], M [auth AM], N [auth AN], O [auth AO], P [auth AP], Q [auth AQ], R [auth AR], S [auth BA], T [auth BB], U [auth BC], V [auth BD], W [auth BE], X [auth BF], Y [auth BG], Z [auth BH]	IPR022413	ATP:guanido phosphotransferase, N-terminal	Domain
A [auth AA], AA [auth BI], B [auth AB], BA [auth BJ], C [auth AC], A [auth AA], AA [auth BI], B [auth AB], BA [auth BJ], C [auth AC], CA [auth BK], D [auth AD], DA [auth BL], E [auth AE], EA [auth BM], F [auth AF], FA [auth BN], G [auth AG], GA [auth BO], H [auth AH], HA [auth BP], I [auth AI], IA [auth BQ], J [auth AJ], JA [auth BR], K [auth AK], L [auth AL], M [auth AM], N [auth AN], O [auth AO], P [auth AP], Q [auth AQ], R [auth AR], S [auth BA], T [auth BB], U [auth BC], V [auth BD], W [auth BE], X [auth BF], Y [auth BG], Z [auth BH]	IPR022414	ATP:guanido phosphotransferase, catalytic domain	Domain
A [auth AA], AA [auth BI], B [auth AB], BA [auth BJ], C [auth AC], A [auth AA], AA [auth BI], B [auth AB], BA [auth BJ], C [auth AC], CA [auth BK], D [auth AD], DA [auth BL], E [auth AE], EA [auth BM], F [auth AF], FA [auth BN], G [auth AG], GA [auth BO], H [auth AH], HA [auth BP], I [auth AI], IA [auth BQ], J [auth AJ], JA [auth BR], K [auth AK], L [auth AL], M [auth AM], N [auth AN], O [auth AO], P [auth AP], Q [auth AQ], R [auth AR], S [auth BA], T [auth BB], U [auth BC], V [auth BD], W [auth BE], X [auth BF], Y [auth BG], Z [auth BH]	IPR036802	ATP:guanido phosphotransferase, N-terminal domain superfamily	Homologous Superfamily
A [auth AA], AA [auth BI], B [auth AB], BA [auth BJ], C [auth AC], A [auth AA], AA [auth BI], B [auth AB], BA [auth BJ], C [auth AC], CA [auth BK], D [auth AD], DA [auth BL], E [auth AE], EA [auth BM], F [auth AF], FA [auth BN], G [auth AG], GA [auth BO], H [auth AH], HA [auth BP], I [auth AI], IA [auth BQ], J [auth AJ], JA [auth BR], K [auth AK], L [auth AL], M [auth AM], N [auth AN], O [auth AO], P [auth AP], Q [auth AQ], R [auth AR], S [auth BA], T [auth BB], U [auth BC], V [auth BD], W [auth BE], X [auth BF], Y [auth BG], Z [auth BH]	IPR014746	Glutamine synthetase/guanido kinase, catalytic domain	Homologous Superfamily
A [auth AA], AA [auth BI], B [auth AB], BA [auth BJ], C [auth AC], A [auth AA], AA [auth BI], B [auth AB], BA [auth BJ], C [auth AC], CA [auth BK], D [auth AD], DA [auth BL], E [auth AE], EA [auth BM], F [auth AF], FA [auth BN], G [auth AG], GA [auth BO], H [auth AH], HA [auth BP], I [auth AI], IA [auth BQ], J [auth AJ], JA [auth BR], K [auth AK], L [auth AL], M [auth AM], N [auth AN], O [auth AO], P [auth AP], Q [auth AQ], R [auth AR], S [auth BA], T [auth BB], U [auth BC], V [auth BD], W [auth BE], X [auth BF], Y [auth BG], Z [auth BH]	IPR000749	ATP:guanido phosphotransferase	Family

RCSB PDB is hosted by

RCSB PDB is a member of

RCSB Partners
Nucleic Acid Knowledgebase

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.