4V4M | pdb_00004v4m

1.45 Angstrom Structure of STNV coat protein


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
A [auth e]SCOP2B SuperfamilySatellite viruses 8038652 3000942 SCOP2B (2022-06-29)
AA [auth 4]SCOP2B SuperfamilySatellite viruses 8038652 3000942 SCOP2B (2022-06-29)
AB [auth W]SCOP2B SuperfamilySatellite viruses 8038652 3000942 SCOP2B (2022-06-29)
B [auth f]SCOP2B SuperfamilySatellite viruses 8038652 3000942 SCOP2B (2022-06-29)
BB [auth X]SCOP2B SuperfamilySatellite viruses 8038652 3000942 SCOP2B (2022-06-29)
CB [auth Y]SCOP2B SuperfamilySatellite viruses 8038652 3000942 SCOP2B (2022-06-29)
D [auth h]SCOP2B SuperfamilySatellite viruses 8038652 3000942 SCOP2B (2022-06-29)
EA [auth A]SCOP2B SuperfamilySatellite viruses 8038652 3000942 SCOP2B (2022-06-29)
F [auth j]SCOP2B SuperfamilySatellite viruses 8038652 3000942 SCOP2B (2022-06-29)
H [auth l]SCOP2B SuperfamilySatellite viruses 8038652 3000942 SCOP2B (2022-06-29)
HA [auth D]SCOP2B SuperfamilySatellite viruses 8038652 3000942 SCOP2B (2022-06-29)
IA [auth E]SCOP2B SuperfamilySatellite viruses 8038652 3000942 SCOP2B (2022-06-29)
J [auth n]SCOP2B SuperfamilySatellite viruses 8038652 3000942 SCOP2B (2022-06-29)
K [auth o]SCOP2B SuperfamilySatellite viruses 8038652 3000942 SCOP2B (2022-06-29)
KA [auth G]SCOP2B SuperfamilySatellite viruses 8038652 3000942 SCOP2B (2022-06-29)
LA [auth H]SCOP2B SuperfamilySatellite viruses 8038652 3000942 SCOP2B (2022-06-29)
M [auth q]SCOP2B SuperfamilySatellite viruses 8038652 3000942 SCOP2B (2022-06-29)
OA [auth K]SCOP2B SuperfamilySatellite viruses 8038652 3000942 SCOP2B (2022-06-29)
P [auth t]SCOP2B SuperfamilySatellite viruses 8038652 3000942 SCOP2B (2022-06-29)
PA [auth L]SCOP2B SuperfamilySatellite viruses 8038652 3000942 SCOP2B (2022-06-29)
S [auth w]SCOP2B SuperfamilySatellite viruses 8038652 3000942 SCOP2B (2022-06-29)
SA [auth O]SCOP2B SuperfamilySatellite viruses 8038652 3000942 SCOP2B (2022-06-29)
TA [auth P]SCOP2B SuperfamilySatellite viruses 8038652 3000942 SCOP2B (2022-06-29)
UA [auth Q]SCOP2B SuperfamilySatellite viruses 8038652 3000942 SCOP2B (2022-06-29)
X [auth 1]SCOP2B SuperfamilySatellite viruses 8038652 3000942 SCOP2B (2022-06-29)
YA [auth U]SCOP2B SuperfamilySatellite viruses 8038652 3000942 SCOP2B (2022-06-29)
Z [auth 3]SCOP2B SuperfamilySatellite viruses 8038652 3000942 SCOP2B (2022-06-29)
ZA [auth V]SCOP2B SuperfamilySatellite viruses 8038652 3000942 SCOP2B (2022-06-29)
Y [auth 2]SCOP2B SuperfamilySatellite viruses 8038652 3000942 SCOP2B (2022-06-29)
XA [auth T]SCOP2B SuperfamilySatellite viruses 8038652 3000942 SCOP2B (2022-06-29)
WA [auth S]SCOP2B SuperfamilySatellite viruses 8038652 3000942 SCOP2B (2022-06-29)
W [auth 0]SCOP2B SuperfamilySatellite viruses 8038652 3000942 SCOP2B (2022-06-29)
VA [auth R]SCOP2B SuperfamilySatellite viruses 8038652 3000942 SCOP2B (2022-06-29)
V [auth z]SCOP2B SuperfamilySatellite viruses 8038652 3000942 SCOP2B (2022-06-29)
U [auth y]SCOP2B SuperfamilySatellite viruses 8038652 3000942 SCOP2B (2022-06-29)
T [auth x]SCOP2B SuperfamilySatellite viruses 8038652 3000942 SCOP2B (2022-06-29)
RA [auth N]SCOP2B SuperfamilySatellite viruses 8038652 3000942 SCOP2B (2022-06-29)
R [auth v]SCOP2B SuperfamilySatellite viruses 8038652 3000942 SCOP2B (2022-06-29)
QA [auth M]SCOP2B SuperfamilySatellite viruses 8038652 3000942 SCOP2B (2022-06-29)
Q [auth u]SCOP2B SuperfamilySatellite viruses 8038652 3000942 SCOP2B (2022-06-29)
O [auth s]SCOP2B SuperfamilySatellite viruses 8038652 3000942 SCOP2B (2022-06-29)
NA [auth J]SCOP2B SuperfamilySatellite viruses 8038652 3000942 SCOP2B (2022-06-29)
N [auth r]SCOP2B SuperfamilySatellite viruses 8038652 3000942 SCOP2B (2022-06-29)
MA [auth I]SCOP2B SuperfamilySatellite viruses 8038652 3000942 SCOP2B (2022-06-29)
L [auth p]SCOP2B SuperfamilySatellite viruses 8038652 3000942 SCOP2B (2022-06-29)
JA [auth F]SCOP2B SuperfamilySatellite viruses 8038652 3000942 SCOP2B (2022-06-29)
I [auth m]SCOP2B SuperfamilySatellite viruses 8038652 3000942 SCOP2B (2022-06-29)
HB [auth d]SCOP2B SuperfamilySatellite viruses 8038652 3000942 SCOP2B (2022-06-29)
GB [auth c]SCOP2B SuperfamilySatellite viruses 8038652 3000942 SCOP2B (2022-06-29)
GA [auth C]SCOP2B SuperfamilySatellite viruses 8038652 3000942 SCOP2B (2022-06-29)
G [auth k]SCOP2B SuperfamilySatellite viruses 8038652 3000942 SCOP2B (2022-06-29)
FB [auth b]SCOP2B SuperfamilySatellite viruses 8038652 3000942 SCOP2B (2022-06-29)
FA [auth B]SCOP2B SuperfamilySatellite viruses 8038652 3000942 SCOP2B (2022-06-29)
EB [auth a]SCOP2B SuperfamilySatellite viruses 8038652 3000942 SCOP2B (2022-06-29)
E [auth i]SCOP2B SuperfamilySatellite viruses 8038652 3000942 SCOP2B (2022-06-29)
DB [auth Z]SCOP2B SuperfamilySatellite viruses 8038652 3000942 SCOP2B (2022-06-29)
DA [auth 7]SCOP2B SuperfamilySatellite viruses 8038652 3000942 SCOP2B (2022-06-29)
CA [auth 6]SCOP2B SuperfamilySatellite viruses 8038652 3000942 SCOP2B (2022-06-29)
C [auth g]SCOP2B SuperfamilySatellite viruses 8038652 3000942 SCOP2B (2022-06-29)
BA [auth 5]SCOP2B SuperfamilySatellite viruses 8038652 3000942 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth e]Ribosomal_S4ee4v4me1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295)
AA [auth 4]Ribosomal_S4ee4v4m41 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295)
AB [auth W]Ribosomal_S4ee4v4mW1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295)
B [auth f]Ribosomal_S4ee4v4mf1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295)
BB [auth X]Ribosomal_S4ee4v4mX1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295)
CB [auth Y]Ribosomal_S4ee4v4mY1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295)
D [auth h]Ribosomal_S4ee4v4mh1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295)
EA [auth A]Ribosomal_S4ee4v4mA1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295)
F [auth j]Ribosomal_S4ee4v4mj1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295)
H [auth l]Ribosomal_S4ee4v4ml1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295)
HA [auth D]Ribosomal_S4ee4v4mD1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295)
IA [auth E]Ribosomal_S4ee4v4mE1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295)
J [auth n]Ribosomal_S4ee4v4mn1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295)
K [auth o]Ribosomal_S4ee4v4mo1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295)
KA [auth G]Ribosomal_S4ee4v4mG1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295)
LA [auth H]Ribosomal_S4ee4v4mH1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295)
M [auth q]Ribosomal_S4ee4v4mq1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295)
OA [auth K]Ribosomal_S4ee4v4mK1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295)
P [auth t]Ribosomal_S4ee4v4mt1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295)
PA [auth L]Ribosomal_S4ee4v4mL1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295)
S [auth w]Ribosomal_S4ee4v4mw1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295)
SA [auth O]Ribosomal_S4ee4v4mO1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295)
TA [auth P]Ribosomal_S4ee4v4mP1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295)
UA [auth Q]Ribosomal_S4ee4v4mQ1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295)
X [auth 1]Ribosomal_S4ee4v4m11 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295)
YA [auth U]Ribosomal_S4ee4v4mU1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295)
Z [auth 3]Ribosomal_S4ee4v4m31 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295)
ZA [auth V]Ribosomal_S4ee4v4mV1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295)
Y [auth 2]Ribosomal_S4ee4v4m21 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295)
XA [auth T]Ribosomal_S4ee4v4mT1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295)
WA [auth S]Ribosomal_S4ee4v4mS1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295)
W [auth 0]Ribosomal_S4ee4v4m01 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295)
VA [auth R]Ribosomal_S4ee4v4mR1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295)
V [auth z]Ribosomal_S4ee4v4mz1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295)
U [auth y]Ribosomal_S4ee4v4my1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295)
T [auth x]Ribosomal_S4ee4v4mx1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295)
RA [auth N]Ribosomal_S4ee4v4mN1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295)
R [auth v]Ribosomal_S4ee4v4mv1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295)
QA [auth M]Ribosomal_S4ee4v4mM1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295)
Q [auth u]Ribosomal_S4ee4v4mu1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295)
O [auth s]Ribosomal_S4ee4v4ms1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295)
NA [auth J]Ribosomal_S4ee4v4mJ1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295)
N [auth r]Ribosomal_S4ee4v4mr1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295)
MA [auth I]Ribosomal_S4ee4v4mI1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295)
L [auth p]Ribosomal_S4ee4v4mp1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295)
JA [auth F]Ribosomal_S4ee4v4mF1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295)
I [auth m]Ribosomal_S4ee4v4mm1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295)
HB [auth d]Ribosomal_S4ee4v4md1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295)
GB [auth c]Ribosomal_S4ee4v4mc1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295)
GA [auth C]Ribosomal_S4ee4v4mC1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295)
G [auth k]Ribosomal_S4ee4v4mk1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295)
FB [auth b]Ribosomal_S4ee4v4mb1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295)
FA [auth B]Ribosomal_S4ee4v4mB1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295)
EB [auth a]Ribosomal_S4ee4v4ma1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295)
E [auth i]Ribosomal_S4ee4v4mi1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295)
DB [auth Z]Ribosomal_S4ee4v4mZ1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295)
DA [auth 7]Ribosomal_S4ee4v4m71 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295)
CA [auth 6]Ribosomal_S4ee4v4m61 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295)
C [auth g]Ribosomal_S4ee4v4mg1 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295)
BA [auth 5]Ribosomal_S4ee4v4m51 A: alpha arraysX: VP4 membrane interaction domainH: VP4 membrane interaction domainT: VP4 membrane interaction domainF: Ribosomal_S4eECOD (v295)

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR005597Satellite tobacco necrosis virus coat protein-likeFamily
IPR037164Satellite virus coat domain superfamilyHomologous Superfamily
IPR010392Satellite virus coatFamily
IPR029053Viral coat protein subunitHomologous Superfamily