4V4F | pdb_00004v4f

The structure of the trp RNA-binding attenuation protein (TRAP) bound to a RNA molecule containing UAGAU repeats


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ZA [auth BI]SCOP2B SuperfamilyTRAP-like 8038933 3001865 SCOP2B (2022-06-29)
Z [auth AP]SCOP2B SuperfamilyTRAP-like 8038933 3001865 SCOP2B (2022-06-29)
YA [auth BH]SCOP2B SuperfamilyTRAP-like 8038933 3001865 SCOP2B (2022-06-29)
Y [auth AO]SCOP2B SuperfamilyTRAP-like 8038933 3001865 SCOP2B (2022-06-29)
XA [auth BG]SCOP2B SuperfamilyTRAP-like 8038933 3001865 SCOP2B (2022-06-29)
X [auth AN]SCOP2B SuperfamilyTRAP-like 8038933 3001865 SCOP2B (2022-06-29)
WA [auth BF]SCOP2B SuperfamilyTRAP-like 8038933 3001865 SCOP2B (2022-06-29)
W [auth AM]SCOP2B SuperfamilyTRAP-like 8038933 3001865 SCOP2B (2022-06-29)
VA [auth BE]SCOP2B SuperfamilyTRAP-like 8038933 3001865 SCOP2B (2022-06-29)
V [auth AL]SCOP2B SuperfamilyTRAP-like 8038933 3001865 SCOP2B (2022-06-29)
UA [auth BD]SCOP2B SuperfamilyTRAP-like 8038933 3001865 SCOP2B (2022-06-29)
U [auth AK]SCOP2B SuperfamilyTRAP-like 8038933 3001865 SCOP2B (2022-06-29)
TA [auth BC]SCOP2B SuperfamilyTRAP-like 8038933 3001865 SCOP2B (2022-06-29)
T [auth AJ]SCOP2B SuperfamilyTRAP-like 8038933 3001865 SCOP2B (2022-06-29)
SA [auth BB]SCOP2B SuperfamilyTRAP-like 8038933 3001865 SCOP2B (2022-06-29)
S [auth AI]SCOP2B SuperfamilyTRAP-like 8038933 3001865 SCOP2B (2022-06-29)
RA [auth BA]SCOP2B SuperfamilyTRAP-like 8038933 3001865 SCOP2B (2022-06-29)
R [auth AH]SCOP2B SuperfamilyTRAP-like 8038933 3001865 SCOP2B (2022-06-29)
Q [auth AG]SCOP2B SuperfamilyTRAP-like 8038933 3001865 SCOP2B (2022-06-29)
P [auth AF]SCOP2B SuperfamilyTRAP-like 8038933 3001865 SCOP2B (2022-06-29)
O [auth AE]SCOP2B SuperfamilyTRAP-like 8038933 3001865 SCOP2B (2022-06-29)
N [auth AD]SCOP2B SuperfamilyTRAP-like 8038933 3001865 SCOP2B (2022-06-29)
MB [auth BV]SCOP2B SuperfamilyTRAP-like 8038933 3001865 SCOP2B (2022-06-29)
M [auth AC]SCOP2B SuperfamilyTRAP-like 8038933 3001865 SCOP2B (2022-06-29)
LB [auth BU]SCOP2B SuperfamilyTRAP-like 8038933 3001865 SCOP2B (2022-06-29)
L [auth AB]SCOP2B SuperfamilyTRAP-like 8038933 3001865 SCOP2B (2022-06-29)
KB [auth BT]SCOP2B SuperfamilyTRAP-like 8038933 3001865 SCOP2B (2022-06-29)
K [auth AA]SCOP2B SuperfamilyTRAP-like 8038933 3001865 SCOP2B (2022-06-29)
JB [auth BS]SCOP2B SuperfamilyTRAP-like 8038933 3001865 SCOP2B (2022-06-29)
IB [auth BR]SCOP2B SuperfamilyTRAP-like 8038933 3001865 SCOP2B (2022-06-29)
HB [auth BQ]SCOP2B SuperfamilyTRAP-like 8038933 3001865 SCOP2B (2022-06-29)
GB [auth BP]SCOP2B SuperfamilyTRAP-like 8038933 3001865 SCOP2B (2022-06-29)
FB [auth BO]SCOP2B SuperfamilyTRAP-like 8038933 3001865 SCOP2B (2022-06-29)
FA [auth AV]SCOP2B SuperfamilyTRAP-like 8038933 3001865 SCOP2B (2022-06-29)
EB [auth BN]SCOP2B SuperfamilyTRAP-like 8038933 3001865 SCOP2B (2022-06-29)
EA [auth AU]SCOP2B SuperfamilyTRAP-like 8038933 3001865 SCOP2B (2022-06-29)
DB [auth BM]SCOP2B SuperfamilyTRAP-like 8038933 3001865 SCOP2B (2022-06-29)
DA [auth AT]SCOP2B SuperfamilyTRAP-like 8038933 3001865 SCOP2B (2022-06-29)
CB [auth BL]SCOP2B SuperfamilyTRAP-like 8038933 3001865 SCOP2B (2022-06-29)
CA [auth AS]SCOP2B SuperfamilyTRAP-like 8038933 3001865 SCOP2B (2022-06-29)
BB [auth BK]SCOP2B SuperfamilyTRAP-like 8038933 3001865 SCOP2B (2022-06-29)
BA [auth AR]SCOP2B SuperfamilyTRAP-like 8038933 3001865 SCOP2B (2022-06-29)
AB [auth BJ]SCOP2B SuperfamilyTRAP-like 8038933 3001865 SCOP2B (2022-06-29)
AA [auth AQ]SCOP2B SuperfamilyTRAP-like 8038933 3001865 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ZA [auth BI]Adeno_Penton_Be4v4fBI1 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: Adeno_Penton_BECOD (v294.1)
Z [auth AP]Adeno_Penton_Be4v4fAP1 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: Adeno_Penton_BECOD (v294.1)
YA [auth BH]Adeno_Penton_Be4v4fBH1 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: Adeno_Penton_BECOD (v294.1)
Y [auth AO]Adeno_Penton_Be4v4fAO1 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: Adeno_Penton_BECOD (v294.1)
XA [auth BG]Adeno_Penton_Be4v4fBG1 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: Adeno_Penton_BECOD (v294.1)
X [auth AN]Adeno_Penton_Be4v4fAN1 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: Adeno_Penton_BECOD (v294.1)
WA [auth BF]Adeno_Penton_Be4v4fBF1 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: Adeno_Penton_BECOD (v294.1)
W [auth AM]Adeno_Penton_Be4v4fAM1 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: Adeno_Penton_BECOD (v294.1)
VA [auth BE]Adeno_Penton_Be4v4fBE1 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: Adeno_Penton_BECOD (v294.1)
V [auth AL]Adeno_Penton_Be4v4fAL1 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: Adeno_Penton_BECOD (v294.1)
UA [auth BD]Adeno_Penton_Be4v4fBD1 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: Adeno_Penton_BECOD (v294.1)
U [auth AK]Adeno_Penton_Be4v4fAK1 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: Adeno_Penton_BECOD (v294.1)
TA [auth BC]Adeno_Penton_Be4v4fBC1 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: Adeno_Penton_BECOD (v294.1)
T [auth AJ]Adeno_Penton_Be4v4fAJ1 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: Adeno_Penton_BECOD (v294.1)
SA [auth BB]Adeno_Penton_Be4v4fBB1 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: Adeno_Penton_BECOD (v294.1)
S [auth AI]Adeno_Penton_Be4v4fAI1 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: Adeno_Penton_BECOD (v294.1)
RA [auth BA]Adeno_Penton_Be4v4fBA1 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: Adeno_Penton_BECOD (v294.1)
R [auth AH]Adeno_Penton_Be4v4fAH1 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: Adeno_Penton_BECOD (v294.1)
Q [auth AG]Adeno_Penton_Be4v4fAG1 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: Adeno_Penton_BECOD (v294.1)
P [auth AF]Adeno_Penton_Be4v4fAF1 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: Adeno_Penton_BECOD (v294.1)
O [auth AE]Adeno_Penton_Be4v4fAE1 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: Adeno_Penton_BECOD (v294.1)
N [auth AD]Adeno_Penton_Be4v4fAD1 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: Adeno_Penton_BECOD (v294.1)
MB [auth BV]Adeno_Penton_Be4v4fBV1 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: Adeno_Penton_BECOD (v294.1)
M [auth AC]Adeno_Penton_Be4v4fAC1 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: Adeno_Penton_BECOD (v294.1)
LB [auth BU]Adeno_Penton_Be4v4fBU1 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: Adeno_Penton_BECOD (v294.1)
L [auth AB]Adeno_Penton_Be4v4fAB1 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: Adeno_Penton_BECOD (v294.1)
KB [auth BT]Adeno_Penton_Be4v4fBT1 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: Adeno_Penton_BECOD (v294.1)
K [auth AA]Adeno_Penton_Be4v4fAA1 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: Adeno_Penton_BECOD (v294.1)
JB [auth BS]Adeno_Penton_Be4v4fBS1 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: Adeno_Penton_BECOD (v294.1)
IB [auth BR]Adeno_Penton_Be4v4fBR1 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: Adeno_Penton_BECOD (v294.1)
HB [auth BQ]Adeno_Penton_Be4v4fBQ1 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: Adeno_Penton_BECOD (v294.1)
GB [auth BP]Adeno_Penton_Be4v4fBP1 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: Adeno_Penton_BECOD (v294.1)
FB [auth BO]Adeno_Penton_Be4v4fBO1 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: Adeno_Penton_BECOD (v294.1)
FA [auth AV]Adeno_Penton_Be4v4fAV1 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: Adeno_Penton_BECOD (v294.1)
EB [auth BN]Adeno_Penton_Be4v4fBN1 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: Adeno_Penton_BECOD (v294.1)
EA [auth AU]Adeno_Penton_Be4v4fAU1 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: Adeno_Penton_BECOD (v294.1)
DB [auth BM]Adeno_Penton_Be4v4fBM1 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: Adeno_Penton_BECOD (v294.1)
DA [auth AT]Adeno_Penton_Be4v4fAT1 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: Adeno_Penton_BECOD (v294.1)
CB [auth BL]Adeno_Penton_Be4v4fBL1 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: Adeno_Penton_BECOD (v294.1)
CA [auth AS]Adeno_Penton_Be4v4fAS1 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: Adeno_Penton_BECOD (v294.1)
BB [auth BK]Adeno_Penton_Be4v4fBK1 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: Adeno_Penton_BECOD (v294.1)
BA [auth AR]Adeno_Penton_Be4v4fAR1 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: Adeno_Penton_BECOD (v294.1)
AB [auth BJ]Adeno_Penton_Be4v4fBJ1 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: Adeno_Penton_BECOD (v294.1)
AA [auth AQ]Adeno_Penton_Be4v4fAQ1 A: a/b three-layered sandwichesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: Adeno_Penton_BECOD (v294.1)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
TRANSCRIPTION ATTENUATION PROTEIN MTRB -
5'-R(*UP*AP*GP*AP*UP)-3'---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR016031Tryptophan RNA-binding attenuator protein-like domain superfamilyHomologous Superfamily
IPR000824Transcription attenuation protein MtrBFamily
IPR023558Tryptophan RNA-binding attenuator protein domainDomain