Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Bd4ui2b_ Small proteins Cystine-knot cytokines Cystine-knot cytokines Transforming growth factor (TGF)-beta automated matches HUMAN (Homo sapiens ) [TaxId: 9606 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
DSCOP2B Superfamilyvon Willebrand factor type D domain-like 8107357 3002872 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyRGM family, N-terminal helical domain 8107356 3002873 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyCystine-knot cytokines 8042164 3000846 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
CRGM_N_Ne4ui2C1 A: alpha bundlesX: Spectrin repeat-likeH: Repulsive guidance molecule (RGM) N-terminal domain (From Topology)T: Repulsive guidance molecule (RGM) N-terminal domainF: RGM_N_NECOD (1.6)
BTGF_betae4ui2B1 A: few secondary structure elementsX: Cystine-knot cytokines (From Topology)H: Cystine-knot cytokines (From Topology)T: Cystine-knot cytokinesF: TGF_betaECOD (1.6)
Afn3e4ui2A2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: fn3ECOD (1.6)
Afn3_6e4ui2A1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: fn3_6ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
D3.40.1000.10 Alpha Beta 3-Layer(aba) Sandwich Protein Transport Mog1p Chain ACATH (4.3.0)
B2.10.90.10 Mainly Beta Ribbon Cystine Knot Cytokines, subunit B Cystine-knot cytokinesCATH (4.3.0)
A2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF06535Repulsive guidance molecule (RGM) N-terminal domain (RGM_N)Repulsive guidance molecule (RGM) N-terminal domainThis entry represents the small N-terminal three helical bundle domain found at the N-terminus of proteins in the Repulsive Guidance Molecule (RGM) family, which is involved in various functions related to nervous system development and signaling. Me ...This entry represents the small N-terminal three helical bundle domain found at the N-terminus of proteins in the Repulsive Guidance Molecule (RGM) family, which is involved in various functions related to nervous system development and signaling. Members of this family act as bone morphogenetic protein (BMP) coreceptors, enhancing BMP signaling pathways. They play crucial roles in regulating neural tube closure, inhibiting neurite outgrowth, and promoting neuronal adhesion. Additionally, they are involved in the regulation of iron homeostasis through the modulation of hepcidin expression. The RGM family also influences axon guidance and synapse formation, contributing to the patterning of the developing nervous system.
Domain
PF06534Repulsive guidance molecule (RGM) C-terminal domain (RGM_C)Repulsive guidance molecule (RGM) C-terminal domainThis entry represents the C-terminal VWD like domain found at the C-terminus of proteins in the Repulsive Guidance Molecule (RGM) family, which is involved in various functions related to nervous system development and signaling. Members of this fami ...This entry represents the C-terminal VWD like domain found at the C-terminus of proteins in the Repulsive Guidance Molecule (RGM) family, which is involved in various functions related to nervous system development and signaling. Members of this family act as bone morphogenetic protein (BMP) coreceptors, enhancing BMP signaling pathways. They play crucial roles in regulating neural tube closure, inhibiting neurite outgrowth, and promoting neuronal adhesion. Additionally, they are involved in the regulation of iron homeostasis through the modulation of hepcidin expression. The RGM family also influences axon guidance and synapse formation, contributing to the patterning of the developing nervous system.
Domain
PF06535Repulsive guidance molecule (RGM) N-terminal domain (RGM_N)Repulsive guidance molecule (RGM) N-terminal domainThis entry represents the small N-terminal three helical bundle domain found at the N-terminus of proteins in the Repulsive Guidance Molecule (RGM) family, which is involved in various functions related to nervous system development and signaling. Me ...This entry represents the small N-terminal three helical bundle domain found at the N-terminus of proteins in the Repulsive Guidance Molecule (RGM) family, which is involved in various functions related to nervous system development and signaling. Members of this family act as bone morphogenetic protein (BMP) coreceptors, enhancing BMP signaling pathways. They play crucial roles in regulating neural tube closure, inhibiting neurite outgrowth, and promoting neuronal adhesion. Additionally, they are involved in the regulation of iron homeostasis through the modulation of hepcidin expression. The RGM family also influences axon guidance and synapse formation, contributing to the patterning of the developing nervous system.
Domain
PF00019Transforming growth factor beta like domain (TGF_beta)Transforming growth factor beta like domainDomain
PF00041Fibronectin type III domain (fn3)Fibronectin type III domainDomain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
REPULSIVE GUIDANCE MOLECULE C, RGMC, HEMOJUVELIN
REPULSIVE GUIDANCE MOLECULE C, RGMC, HEMOJUVELIN
BONE MORPHOGENETIC PROTEIN 2, BMP2
NEOGENIN

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
PharosQ6NW40
PharosQ6NW40
PharosP12643
PharosQ92859