4UD1 | pdb_00004ud1

Structure of the N Terminal domain of the MERS CoV nucleocapsid

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilySARS coronavirus nucleoprotein RNA-binding domain-like 8080136 4001881 SCOP2 (2022-06-29)
ASCOP2 SuperfamilySARS coronavirus nucleoprotein RNA-binding domain-like 8080137 3000498 SCOP2 (2022-06-29)
BSCOP2B SuperfamilySARS coronavirus nucleoprotein RNA-binding domain-like 8080137 3000498 SCOP2B (2022-06-29)
CSCOP2B SuperfamilySARS coronavirus nucleoprotein RNA-binding domain-like 8080137 3000498 SCOP2B (2022-06-29)
ESCOP2B SuperfamilySARS coronavirus nucleoprotein RNA-binding domain-like 8080137 3000498 SCOP2B (2022-06-29)
DSCOP2B SuperfamilySARS coronavirus nucleoprotein RNA-binding domain-like 8080137 3000498 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AFAD_binding_3e4ud1A1 A: a/b three-layered sandwichesX: CBS-domainH: PorinsT: Invertebrate chitin-binding proteinsF: FAD_binding_3ECOD (v294.1)
BFAD_binding_3e4ud1B1 A: a/b three-layered sandwichesX: CBS-domainH: PorinsT: Invertebrate chitin-binding proteinsF: FAD_binding_3ECOD (v294.1)
CFAD_binding_3e4ud1C1 A: a/b three-layered sandwichesX: CBS-domainH: PorinsT: Invertebrate chitin-binding proteinsF: FAD_binding_3ECOD (v294.1)
EFAD_binding_3e4ud1E1 A: a/b three-layered sandwichesX: CBS-domainH: PorinsT: Invertebrate chitin-binding proteinsF: FAD_binding_3ECOD (v294.1)
DFAD_binding_3e4ud1D1 A: a/b three-layered sandwichesX: CBS-domainH: PorinsT: Invertebrate chitin-binding proteinsF: FAD_binding_3ECOD (v294.1)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D, E
N PROTEIN -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR001218Nucleocapsid protein, coronavirusFamily
A, B, C, D, E
IPR044344Nucleocapsid (N) protein, C-terminal domain, coronavirusDomain
A, B, C, D, E
IPR037195Nucleocapsid protein, N-terminalHomologous Superfamily
A, B, C, D, E
IPR044345Nucleocapsid (N) protein, N-terminal domain, coronavirusDomain