4U9P | pdb_00004u9p

Structure of the methanofuran/methanopterin biosynthetic enzyme MJ1099 from Methanocaldococcus jannaschii

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
C	SCOP2 Family	MfnB-like	8045990	4004805	SCOP2 (2022-06-29)
C	SCOP2 Superfamily	CutC/MfnB-like	8092553	3000639	SCOP2 (2022-06-29)
B	SCOP2B Superfamily	CutC/MfnB-like	8092553	3000639	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	CutC/MfnB-like	8092553	3000639	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
C	H_PPase	e4u9pC1	A: a/b three-layered sandwiches	X: jelly-roll	H: Double-stranded beta-helix	T: Double-stranded beta-helix	F: H_PPase	ECOD (v294.1)
B	H_PPase	e4u9pB1	A: a/b three-layered sandwiches	X: jelly-roll	H: Double-stranded beta-helix	T: Double-stranded beta-helix	F: H_PPase	ECOD (v294.1)
A	H_PPase	e4u9pA1	A: a/b three-layered sandwiches	X: jelly-roll	H: Double-stranded beta-helix	T: Double-stranded beta-helix	F: H_PPase	ECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C	PF04476	4-HFC-P synthase (4HFCP_synth)	4-HFC-P synthase	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C	UPF0264 protein MJ1099	lyase activity catalytic activity carbon-carbon lyase activity	biosynthetic process methanofuran metabolic process metabolic process cellular process methanofuran biosynthetic process	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C	IPR007565	(5-formylfuran-3-yl)methyl phosphate synthase	Family
A, B, C	IPR011060	Ribulose-phosphate binding barrel	Homologous Superfamily
A, B, C	IPR035081	(5-formylfuran-3-yl)methyl phosphate synthase, archaea	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.