Crystal structure of the Clostridium histolyticum colH collagenase polycystic kidney disease-like domain 2a at 1.76 Angstrom resolution
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| D | e4u6tD1 | A: Alpha-beta plaits | X: Protease propeptides/inhibitors | H: Protease propeptides/inhibitors | T: SBP_bac_5 | F: | ECOD (20:10:01) | |
| C | e4u6tC1 | A: Rubredoxin-like | X: Rubredoxin-related | H: Rubredoxin-related | T: Peptidase_M28 | F: | ECOD (20:10:01) | |
| B | e4u6tB1 | A: Anticodon-binding domain of Class II aaRS | X: Anticodon-binding domain of Class II aaRS | H: Anticodon-binding domain of Class II aaRS | T: Flavodoxin_2 | F: | ECOD (20:10:01) | |
| A | e4u6tA1 | A: Anticodon-binding domain of Class II aaRS | X: Anticodon-binding domain of Class II aaRS | H: Anticodon-binding domain of Class II aaRS | T: DNA_pol_A | F: | ECOD (20:10:01) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| D | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
| C | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
| B | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
| A | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR022409 | PKD/Chitinase domain | Domain | |
| IPR000601 | PKD domain | Domain | |
| IPR013661 | Peptidase M9, collagenase, N-terminal domain | Domain | |
| IPR013320 | Concanavalin A-like lectin/glucanase domain superfamily | Homologous Superfamily | |
| IPR035986 | PKD domain superfamily | Homologous Superfamily | |
| IPR013783 | Immunoglobulin-like fold | Homologous Superfamily | |
| IPR041379 | Collagenase ColG-like, catalytic helper subdomain | Domain | |
| IPR007280 | Peptidase, C-terminal, archaeal/bacterial | Domain | |
| IPR002169 | Peptidase M9A/M9B, collagenase, bacterial | Family |














