4TX8 | pdb_00004tx8

Crystal Structure of a Family GH18 Chitinase from Chromobacterium violaceum

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	s48_45	e4tx8A1	A: a/b three-layered sandwiches	X: C-terminal additional helical subdomain in reovirus polymerase lambda3	H: Surface antigen 1 (SAG1)-related-sequence (SRS) family	T: Surface antigen 1 (SAG1)-related-sequence (SRS) family	F: s48_45	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	2.10.10.20	Mainly Beta	Ribbon	Seminal Fluid Protein PDC-109 (Domain B)	Carbohydrate-binding module superfamily 5/12	CATH (4.3.0)
A	3.20.20.80	Alpha Beta	Alpha-Beta Barrel	TIM Barrel	Glycosidases	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF00704	Glycosyl hydrolases family 18 (Glyco_hydro_18)	Glycosyl hydrolases family 18		Domain
A	PF02839	Carbohydrate-binding module family 5/12 (CBM_5_12)	Carbohydrate-binding module family 5/12	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Probable chitinase A	binding carbohydrate binding chitinase activity hydrolase activity, acting on glycosyl bonds hydrolase activity, hydrolyzing O-glycosyl compounds hydrolase activity catalytic activity endochitinase activity chitin binding carbohydrate derivative binding cation binding ion binding metal ion binding small molecule binding	carbohydrate metabolic process primary metabolic process metabolic process cellular process	cellular anatomical structure extracellular region

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR017853	Glycoside hydrolase superfamily	Homologous Superfamily
A	IPR001579	Glycosyl hydrolase family 18, active site	Active Site
A	IPR003610	Carbohydrate binding module family 5/12	Domain
A	IPR001223	Glycoside hydrolase family 18, catalytic domain	Domain
A	IPR050542	Glycosyl_Hydrlase18_Chitinase	Unknown
A	IPR011583	Chitinase II/V-like, catalytic domain	Domain
A	IPR036573	Carbohydrate-binding module superfamily 5/12	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.