Crystal structure of metallopeptidase-like dimethylsulphoniopropionate (DMSP) lyase RlDddP in complex with MES
External Resource: Annotation
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | DHFR_1 | e4rzyA1 | A: alpha arrays | X: Rossmann-like | H: 26S proteasome subunit Rpn2 C-terminal domain | T: 26S proteasome subunit Rpn2 C-terminal domain | F: DHFR_1 | ECOD (v295.2) |
| B | DHFR_1 | e4rzyB1 | A: alpha arrays | X: Rossmann-like | H: 26S proteasome subunit Rpn2 C-terminal domain | T: 26S proteasome subunit Rpn2 C-terminal domain | F: DHFR_1 | ECOD (v295.2) |
| C | DHFR_1 | e4rzyC1 | A: alpha arrays | X: Rossmann-like | H: 26S proteasome subunit Rpn2 C-terminal domain | T: 26S proteasome subunit Rpn2 C-terminal domain | F: DHFR_1 | ECOD (v295.2) |
| D | DHFR_1 | e4rzyD1 | A: alpha arrays | X: Rossmann-like | H: 26S proteasome subunit Rpn2 C-terminal domain | T: 26S proteasome subunit Rpn2 C-terminal domain | F: DHFR_1 | ECOD (v295.2) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 3.40.350.10 | Alpha Beta | 3-Layer(aba) Sandwich | Creatine Amidinohydrolase | Chain A, domain 1 | CATH (4.3.0) |
| A | 3.90.230.10 | Alpha Beta | Alpha-Beta Complex | Creatine Amidinohydrolase | Creatinase/methionine aminopeptidase superfamily | CATH (4.3.0) |
| B | 3.40.350.10 | Alpha Beta | 3-Layer(aba) Sandwich | Creatine Amidinohydrolase | Chain A, domain 1 | CATH (4.3.0) |
| B | 3.90.230.10 | Alpha Beta | Alpha-Beta Complex | Creatine Amidinohydrolase | Creatinase/methionine aminopeptidase superfamily | CATH (4.3.0) |
| C | 3.40.350.10 | Alpha Beta | 3-Layer(aba) Sandwich | Creatine Amidinohydrolase | Chain A, domain 1 | CATH (4.3.0) |
| C | 3.90.230.10 | Alpha Beta | Alpha-Beta Complex | Creatine Amidinohydrolase | Creatinase/methionine aminopeptidase superfamily | CATH (4.3.0) |
| D | 3.40.350.10 | Alpha Beta | 3-Layer(aba) Sandwich | Creatine Amidinohydrolase | Chain A, domain 1 | CATH (4.3.0) |
| D | 3.90.230.10 | Alpha Beta | Alpha-Beta Complex | Creatine Amidinohydrolase | Creatinase/methionine aminopeptidase superfamily | CATH (4.3.0) |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR029149 | Creatinase/Aminopeptidase P/Spt16, N-terminal | Homologous Superfamily | |
| IPR050659 | Peptidase M24B family | Family | |
| IPR050020 | Dimethylsulfoniopropionate lyase DddP | Family | |
| IPR036005 | Creatinase/aminopeptidase-like | Homologous Superfamily | |
| IPR000994 | Peptidase M24 | Domain |
