Crystal structure of periplasmic solute binding protein ECA2210 from Pectobacterium atrosepticum SCRI1043, Target EFI-510858
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | d4ry1b1 | Alpha and beta proteins (a/b) | Periplasmic binding protein-like II | Periplasmic binding protein-like II | automated matches | automated matches | (Pectobacterium atrosepticum SCRI1043 ) [TaxId: 218491 ], | SCOPe (2.08) |
| B | d4ry1b2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Pectobacterium atrosepticum SCRI1043 ) [TaxId: 218491 ], | SCOPe (2.08) |
| A | d4ry1a1 | Alpha and beta proteins (a/b) | Periplasmic binding protein-like II | Periplasmic binding protein-like II | automated matches | automated matches | (Pectobacterium atrosepticum SCRI1043 ) [TaxId: 218491 ], | SCOPe (2.08) |
| A | d4ry1a2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Pectobacterium atrosepticum SCRI1043 ) [TaxId: 218491 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | e4ry1B1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Glycosyl hydrolase domain | T: Glycosyl hydrolase domain | F: | ECOD (v294.1) | |
| A | SBP_bac_1 | e4ry1A1 | A: a/b three-layered sandwiches | X: Rossmann-like | H: Glycosyl hydrolase domain | T: Glycosyl hydrolase domain | F: SBP_bac_1 | ECOD (v294.1) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| B | 3.40.190.10 | Alpha Beta | 3-Layer(aba) Sandwich | D-Maltodextrin-Binding Protein | domain 2 | CATH (4.3.0) |
| A | 3.40.190.10 | Alpha Beta | 3-Layer(aba) Sandwich | D-Maltodextrin-Binding Protein | domain 2 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF01547 | Bacterial extracellular solute-binding protein (SBP_bac_1) | Bacterial extracellular solute-binding protein | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Periplasmic solute binding protein | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR050490 | Bacterial solute-binding protein 1 | Family | |
| IPR006059 | Bacterial-type extracellular solute-binding protein | Family |
