4RLD | pdb_00004rld

Crystal structure of kkf mutant of bla G 2 protein

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
D	d4rldd1	All beta proteins	Acid proteases	Acid proteases	automated matches	automated matches	German cockroach (Blattella germanica ) [TaxId: 6973 ],	SCOPe (2.08)
D	d4rldd2	Artifacts	Tags	Tags	Tags	N-terminal Tags	German cockroach (Blattella germanica ) [TaxId: 6973 ],	SCOPe (2.08)
C	d4rldc1	All beta proteins	Acid proteases	Acid proteases	automated matches	automated matches	German cockroach (Blattella germanica ) [TaxId: 6973 ],	SCOPe (2.08)
C	d4rldc2	Artifacts	Tags	Tags	Tags	N-terminal Tags	German cockroach (Blattella germanica ) [TaxId: 6973 ],	SCOPe (2.08)
B	d4rldb1	All beta proteins	Acid proteases	Acid proteases	automated matches	automated matches	German cockroach (Blattella germanica ) [TaxId: 6973 ],	SCOPe (2.08)
B	d4rldb2	Artifacts	Tags	Tags	Tags	N-terminal Tags	German cockroach (Blattella germanica ) [TaxId: 6973 ],	SCOPe (2.08)
A	d4rlda1	All beta proteins	Acid proteases	Acid proteases	automated matches	automated matches	German cockroach (Blattella germanica ) [TaxId: 6973 ],	SCOPe (2.08)
A	d4rlda2	Artifacts	Tags	Tags	Tags	N-terminal Tags	German cockroach (Blattella germanica ) [TaxId: 6973 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
D	SCOP2B Superfamily	Acid proteases	8066387	3001059	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Acid proteases	8066387	3001059	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Acid proteases	8066387	3001059	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Acid proteases	8066387	3001059	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D		e4rldD1	A: a/b three-layered sandwiches	X: C-terminal additional helical subdomain in reovirus polymerase lambda3	H: C-terminal additional helical subdomain in reovirus polymerase lambda3	T: C-terminal additional helical subdomain in reovirus polymerase lambda3	F:	ECOD (v294.1)
C		e4rldC1	A: a/b three-layered sandwiches	X: C-terminal additional helical subdomain in reovirus polymerase lambda3	H: C-terminal additional helical subdomain in reovirus polymerase lambda3	T: C-terminal additional helical subdomain in reovirus polymerase lambda3	F:	ECOD (v294.1)
B		e4rldB1	A: a/b three-layered sandwiches	X: C-terminal additional helical subdomain in reovirus polymerase lambda3	H: C-terminal additional helical subdomain in reovirus polymerase lambda3	T: C-terminal additional helical subdomain in reovirus polymerase lambda3	F:	ECOD (v294.1)
A		e4rldA1	A: a/b three-layered sandwiches	X: C-terminal additional helical subdomain in reovirus polymerase lambda3	H: C-terminal additional helical subdomain in reovirus polymerase lambda3	T: C-terminal additional helical subdomain in reovirus polymerase lambda3	F:	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
D	2.60.40.1960	Mainly Beta	Sandwich	Immunoglobulin-like		CATH (4.3.0)
D	2.40.70.10	Mainly Beta	Beta Barrel	Cathepsin D, subunit A	domain 1	CATH (4.3.0)
C	2.60.40.1960	Mainly Beta	Sandwich	Immunoglobulin-like		CATH (4.3.0)
C	2.40.70.10	Mainly Beta	Beta Barrel	Cathepsin D, subunit A	domain 1	CATH (4.3.0)
B	2.60.40.1960	Mainly Beta	Sandwich	Immunoglobulin-like		CATH (4.3.0)
B	2.40.70.10	Mainly Beta	Beta Barrel	Cathepsin D, subunit A	domain 1	CATH (4.3.0)
A	2.60.40.1960	Mainly Beta	Sandwich	Immunoglobulin-like		CATH (4.3.0)
A	2.40.70.10	Mainly Beta	Beta Barrel	Cathepsin D, subunit A	domain 1	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	Aspartic protease Bla g 2	aspartic-type peptidase activity peptidase activity catalytic activity, acting on a protein hydrolase activity aspartic-type endopeptidase activity catalytic activity endopeptidase activity cation binding ion binding binding metal ion binding small molecule binding	proteolysis metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR001461	Aspartic peptidase A1	Family
A, B, C, D	IPR033121	Peptidase family A1 domain	Domain
A, B, C, D	IPR034164	Pepsin-like domain	Domain
A, B, C, D	IPR021109	Aspartic peptidase domain superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.