Crystal structure analysis of LpxA, a UDP-N-acetylglucosamine acyltransferase from Bacteroides fragilis 9343 with UDP-GlcNAc
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | d4r37b_ | All beta proteins | Single-stranded left-handed beta-helix | Trimeric LpxA-like enzymes | automated matches | automated matches | (Bacteroides fragilis NCTC 9343 ) [TaxId: 272559 ], | SCOPe (2.08) |
| A | d4r37a_ | All beta proteins | Single-stranded left-handed beta-helix | Trimeric LpxA-like enzymes | automated matches | automated matches | (Bacteroides fragilis NCTC 9343 ) [TaxId: 272559 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | DUF4847 | e4r37B1 | A: alpha arrays | X: beta-propeller-like | H: beta-propeller | T: Nucleic acid-binding protein | F: DUF4847 | ECOD (v295.2) |
| A | DUF4847 | e4r37A1 | A: alpha arrays | X: beta-propeller-like | H: beta-propeller | T: Nucleic acid-binding protein | F: DUF4847 | ECOD (v295.2) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| B | 2.160.10.10 | Mainly Beta | 3 Solenoid | UDP N-Acetylglucosamine Acyltransferase | domain 1 | CATH (4.3.0) |
| B | 1.20.1180.10 | Mainly Alpha | Up-down Bundle | Udp N-acetylglucosamine O-acyltransferase | Domain 2 | CATH (4.3.0) |
| A | 2.160.10.10 | Mainly Beta | 3 Solenoid | UDP N-Acetylglucosamine Acyltransferase | domain 1 | CATH (4.3.0) |
| A | 1.20.1180.10 | Mainly Alpha | Up-down Bundle | Udp N-acetylglucosamine O-acyltransferase | Domain 2 | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Putative acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR011004 | Trimeric LpxA-like superfamily | Homologous Superfamily | |
| IPR029098 | UDP N-acetylglucosamine O-acyltransferase, C-terminal | Domain | |
| IPR010137 | Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase | Family | |
| IPR037157 | UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily | Homologous Superfamily | |
| IPR001451 | Hexapeptide repeat | Repeat |