4QRO | pdb_00004qro

CRYSTAL STRUCTURE of DIHYDROXYBENZOIC ACID DECARBBOXYLASE BPRO_2061 (TARGET EFI-500288) FROM POLAROMONAS SP. JS666 WITH BOUND MANGANESE AND AN INHIBITOR, 2-NITRORESORCINOL

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
HSCOP2B SuperfamilyMetallo-dependent hydrolases 8061218 3000428 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyMetallo-dependent hydrolases 8061218 3000428 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyMetallo-dependent hydrolases 8061218 3000428 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyMetallo-dependent hydrolases 8061218 3000428 SCOP2B (2022-06-29)
DSCOP2 FamilyPP1699/LP2961-like 8061217 4002329 SCOP2 (2022-06-29)
DSCOP2 SuperfamilyMetallo-dependent hydrolases 8061218 3000428 SCOP2 (2022-06-29)
CSCOP2B SuperfamilyMetallo-dependent hydrolases 8061218 3000428 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyMetallo-dependent hydrolases 8061218 3000428 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyMetallo-dependent hydrolases 8061218 3000428 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
He4qroH1 A: avirulence protein AvrPiz-t homologsX: avirulence protein AvrPiz-t homologsH: avirulence protein AvrPiz-t homologsT:F:ECOD (20:10:01)
Ge4qroG1 A: avirulence protein AvrPiz-t homologsX: avirulence protein AvrPiz-t homologsH: avirulence protein AvrPiz-t homologsT:F:ECOD (20:10:01)
Fe4qroF1 A: avirulence protein AvrPiz-t homologsX: avirulence protein AvrPiz-t homologsH: avirulence protein AvrPiz-t homologsT:F:ECOD (20:10:01)
Ee4qroE1 A: avirulence protein AvrPiz-t homologsX: avirulence protein AvrPiz-t homologsH: avirulence protein AvrPiz-t homologsT:F:ECOD (20:10:01)
De4qroD1 A: avirulence protein AvrPiz-t homologsX: avirulence protein AvrPiz-t homologsH: avirulence protein AvrPiz-t homologsT:F:ECOD (20:10:01)
Ce4qroC1 A: avirulence protein AvrPiz-t homologsX: avirulence protein AvrPiz-t homologsH: avirulence protein AvrPiz-t homologsT:F:ECOD (20:10:01)
Be4qroB1 A: avirulence protein AvrPiz-t homologsX: avirulence protein AvrPiz-t homologsH: avirulence protein AvrPiz-t homologsT:F:ECOD (20:10:01)
Ae4qroA1 A: avirulence protein AvrPiz-t homologsX: avirulence protein AvrPiz-t homologsH: avirulence protein AvrPiz-t homologsT:F:ECOD (20:10:01)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
H3.20.20.140 Alpha Beta Alpha-Beta Barrel TIM Barrel Metal-dependent hydrolasesCATH (4.3.0)
G3.20.20.140 Alpha Beta Alpha-Beta Barrel TIM Barrel Metal-dependent hydrolasesCATH (4.3.0)
F3.20.20.140 Alpha Beta Alpha-Beta Barrel TIM Barrel Metal-dependent hydrolasesCATH (4.3.0)
E3.20.20.140 Alpha Beta Alpha-Beta Barrel TIM Barrel Metal-dependent hydrolasesCATH (4.3.0)
D3.20.20.140 Alpha Beta Alpha-Beta Barrel TIM Barrel Metal-dependent hydrolasesCATH (4.3.0)
C3.20.20.140 Alpha Beta Alpha-Beta Barrel TIM Barrel Metal-dependent hydrolasesCATH (4.3.0)
B3.20.20.140 Alpha Beta Alpha-Beta Barrel TIM Barrel Metal-dependent hydrolasesCATH (4.3.0)
A3.20.20.140 Alpha Beta Alpha-Beta Barrel TIM Barrel Metal-dependent hydrolasesCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D, E
PF04909Amidohydrolase (Amidohydro_2)AmidohydrolaseThese proteins are amidohydrolases that are related to Pfam:PF01979 [1]. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D, E
Gamma-resorcylate decarboxylase

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR0324652-amino-3-carboxymuconate-6-semialdehyde decarboxylaseFamily
A, B, C, D, E
IPR006680Amidohydrolase-relatedDomain
A, B, C, D, E
IPR032466Metal-dependent hydrolaseHomologous Superfamily

Structure Motif Annotation: Mechanism and Catalytic Site Atlas M-CSA Database Homepage

ChainsEnzyme NameDescriptionCatalytic Residues
Resorcylate decarboxylase  M-CSA #992

γ-Resorcylate decarboxylase (γ-RSD) has evolved to catalyse the decarboxylation of 2,6-dihydroxybenzoate to resorcinol. This enzyme is of significant interest because of its potential for the production of γ-resorcylate and other benzoic acid derivatives under environmentally sustainable conditions. It contains a manganese ion and an aspartate in the active site responsible for the reaction. The reaction is reversible, but equilibrium greatly favors the decarboxylation reaction.

Defined by 4 residues: GLU:G-8HIS:G-10HIS:G-164ASP:G-287
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Explore in 3D: M-CSA Motif Definition
Search M-CSA Motif
EC: 4.1.1.103 (UniProt)