4QR8 | pdb_00004qr8

Crystal Structure of E coli pepQ


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BDockerin_1e4qr8B1 A: a/b three-layered sandwichesX: Ribonuclease H-likeH: Rossmann-relatedT: S-adenosyl-L-methionine-dependent methyltransferasesF: Dockerin_1ECOD (v294.1)
ACBM_X2e4qr8A1 A: a/b three-layered sandwichesX: Ribonuclease H-likeH: Rossmann-relatedT: S-adenosyl-L-methionine-dependent methyltransferasesF: CBM_X2ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF00557Metallopeptidase family M24 (Peptidase_M24)Metallopeptidase family M24This family contains metallopeptidases. It also contains non-peptidase homologues such as the N terminal domain of Spt16 which is a histone H3-H4 binding module [3]. Domain
A, B
PF21216Xaa-Pro dipeptidase, N-terminal domain (PepQ_N)Xaa-Pro dipeptidase, N-terminal domainThis domain is found in Xaa-Pro dipeptidase from Escherichia coli (PepQ), a metalloprotease that catalyse the cleavage of Xaa-Pro dipeptides. This protein is organised into N-terminal (this entry) and C-terminal (usually Pfam:PF00557) domains and ad ...This domain is found in Xaa-Pro dipeptidase from Escherichia coli (PepQ), a metalloprotease that catalyse the cleavage of Xaa-Pro dipeptides. This protein is organised into N-terminal (this entry) and C-terminal (usually Pfam:PF00557) domains and adopts a dimeric configuration. This domain shows an alpha-beta structure with four helices, one pair flanking each side of the six-stranded mixed beta-sheet [1-5].
Domain