4QJU | pdb_00004qju

Crystal structure of DNA-bound nucleoid associated protein, SAV1473


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BSCOP2B SuperfamilyIHF-like DNA-binding proteins 8072002 3000426 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyIHF-like DNA-binding proteins 8072002 3000426 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BC2e4qjuB1 A: a/b three-layered sandwichesX: CCHC-type 1 zinc fingerH: Retrovirus zinc finger-related domainsT: Retrovirus zinc finger-related domainsF: C2ECOD (v294.1)
AC2e4qjuA1 A: a/b three-layered sandwichesX: CCHC-type 1 zinc fingerH: Retrovirus zinc finger-related domainsT: Retrovirus zinc finger-related domainsF: C2ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B4.10.520.10 Few Secondary Structures Irregular HU Protein Chain ACATH (4.3.0)
A4.10.520.10 Few Secondary Structures Irregular HU Protein Chain ACATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
C, D
DNA (5'-D(*TP*GP*CP*TP*TP*AP*TP*CP*AP*AP*TP*TP*TP*GP*TP*TP*GP*CP*AP*CP*C)-3')---
A, B
DNA-binding protein HU