Crystal structure of a putative hydrolase (BVU_2763) from Bacteroides vulgatus ATCC 8482 at 2.44 A resolution
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| D | Ribosomal_L18_c,Ribosomal_L5e | e4qhbD1 | A: a/b three-layered sandwiches | X: Outer membrane meander beta-barrels | H: Porins | T: Porin | F: Ribosomal_L18_c,Ribosomal_L5e | ECOD (v294.1) |
| C | Ribosomal_L18_c,Ribosomal_L5e | e4qhbC1 | A: a/b three-layered sandwiches | X: Outer membrane meander beta-barrels | H: Porins | T: Porin | F: Ribosomal_L18_c,Ribosomal_L5e | ECOD (v294.1) |
| B | Ribosomal_L18_c,Ribosomal_L5e | e4qhbB1 | A: a/b three-layered sandwiches | X: Outer membrane meander beta-barrels | H: Porins | T: Porin | F: Ribosomal_L18_c,Ribosomal_L5e | ECOD (v294.1) |
| A | Ribosomal_L18_c,Ribosomal_L5e | e4qhbA1 | A: a/b three-layered sandwiches | X: Outer membrane meander beta-barrels | H: Porins | T: Porin | F: Ribosomal_L18_c,Ribosomal_L5e | ECOD (v294.1) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| D | 2.60.120.1570 | Mainly Beta | Sandwich | Jelly Rolls | Peptide-N-glycosidase F, N-terminal domain | CATH (4.3.0) |
| D | 2.60.120.230 | Mainly Beta | Sandwich | Jelly Rolls | CATH (4.3.0) | |
| C | 2.60.120.1570 | Mainly Beta | Sandwich | Jelly Rolls | Peptide-N-glycosidase F, N-terminal domain | CATH (4.3.0) |
| C | 2.60.120.230 | Mainly Beta | Sandwich | Jelly Rolls | CATH (4.3.0) | |
| B | 2.60.120.1570 | Mainly Beta | Sandwich | Jelly Rolls | Peptide-N-glycosidase F, N-terminal domain | CATH (4.3.0) |
| B | 2.60.120.230 | Mainly Beta | Sandwich | Jelly Rolls | CATH (4.3.0) | |
| A | 2.60.120.1570 | Mainly Beta | Sandwich | Jelly Rolls | Peptide-N-glycosidase F, N-terminal domain | CATH (4.3.0) |
| A | 2.60.120.230 | Mainly Beta | Sandwich | Jelly Rolls | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Uncharacterized protein |
| - | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR008977 | PHM/PNGase F domain superfamily | Homologous Superfamily | |
| IPR015197 | Peptide-N-glycosidase F, C-terminal | Domain | |
| IPR014784 | Copper type II, ascorbate-dependent monooxygenase-like, C-terminal | Homologous Superfamily | |
| IPR043022 | Peptide-N-glycosidase F, N-terminal domain superfamily | Homologous Superfamily | |
| IPR015196 | Peptide-N-glycosidase F, N-terminal | Domain |
