4Q7C | pdb_00004q7c

Structure of AF2299, a CDP-alcohol phosphotransferase

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BSCOP2B SuperfamilyDIPPS domain-like 8090041 3002413 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyNucleotide-diphospho-sugar transferases 8090044 3000077 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyNucleotide-diphospho-sugar transferases 8090044 3000077 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyDIPPS domain-like 8090041 3002413 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
Be4q7cB1 A: Outer membrane meander beta-barrelsX: PorinsH: PorinT: HemagglutininF:ECOD (20:10:01)
Ae4q7cA1 A: beta-propeller-likeX: beta-propellerH: 7-bladedT: MMS1_NF:ECOD (20:10:01)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B3.90.550.30 Alpha Beta Alpha-Beta Complex Spore Coat Polysaccharide Biosynthesis Protein SpsA Chain ACATH (4.3.0)
B1.20.120.1760 Mainly Alpha Up-down Bundle Four Helix Bundle (Hemerythrin (Met), subunit A) CDP-alcohol phosphotransferase transmembrane (TM) domainCATH (4.3.0)
A3.90.550.30 Alpha Beta Alpha-Beta Complex Spore Coat Polysaccharide Biosynthesis Protein SpsA Chain ACATH (4.3.0)
A1.20.120.1760 Mainly Alpha Up-down Bundle Four Helix Bundle (Hemerythrin (Met), subunit A) CDP-alcohol phosphotransferase transmembrane (TM) domainCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF21682CDP-alcohol phosphatidyltransferase AF_2299-like, N-terminal (AF_2299-like_N)CDP-alcohol phosphatidyltransferase AF_2299-like, N-terminalThis domain is found at the N-terminal end of CDP-alcohol phosphatidyltransferase family protein from Archaeoglobus fulgidus (AF_2299) and similar archaeal proteins. AF_2299 is a member of a family of membrane-embedded enzymes known as CDP-alcohol ph ...This domain is found at the N-terminal end of CDP-alcohol phosphatidyltransferase family protein from Archaeoglobus fulgidus (AF_2299) and similar archaeal proteins. AF_2299 is a member of a family of membrane-embedded enzymes known as CDP-alcohol phosphotransferases (CDP-APs) involved in the formation of polar phospholipids. This integral membrane phosphotransferase is organised into two distinct domains. This entry represents the N-terminal cytoplasmic domain, which has structural similarity to the cytidyltransferases [1-3].
Domain
A, B
PF01066CDP-alcohol phosphatidyltransferase (CDP-OH_P_transf)CDP-alcohol phosphatidyltransferase- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
AF2299, a CDP-alcohol phosphotransferase

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR043130CDP-alcohol phosphatidyltransferase, transmembrane domainHomologous Superfamily
A, B
IPR049037CDP-alcohol phosphatidyltransferase AF_2299-like, N-terminal domainDomain
A, B
IPR048254CDP-alcohol phosphatidyltransferase, conserved siteConserved Site
A, B
IPR000462CDP-alcohol phosphatidyltransferaseFamily

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

ChainsExternal LinkComment
A, B
PDBTMAnnotated as membrane protein by PDBTM

Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage

ChainsExternal LinkComment
A, B
MemProtMDAnnotated as membrane protein by MemProtMD

Membrane Protein Annotation: mpstruc mpstruc Database Homepage

ChainsResource LinkGroupSubgroupProtein
A, B
mpstrucTRANSMEMBRANE PROTEINS: ALPHA-HELICALCDP-Alcohol PhosphotransferasesAF2299 CDP-alcohol phosphotransferase w. bound CMP