Crystal structure of a N-acetylmuramoyl-L-alanine amidase (BACUNI_02947) from Bacteroides uniformis ATCC 8492 at 1.07 A resolution


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AQueFe4q68A1 A: alpha arraysX: Glycosyl hydrolase domain-likeH: alpha/alpha toroidT: alpha/alpha toroidF: QueFECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A1.10.3670.10 Mainly Alpha Orthogonal Bundle Putative xylanase fold Putative xylanase like domainCATH (4.3.0)
A2.30.260.10 Mainly Beta Roll putative xylanase like fold putative xylanase like domainCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF07313N-acetylmuramoyl-L-alanine amidase-like (AmiA-like)N-acetylmuramoyl-L-alanine amidase-likeThis family includes N-acetylmuramoyl-L-alanine amidase (AMA) from Bacteroides uniformis and similar bacterial proteins. AmiA hydrolyses GlcNAc-1,6-anhydro-MurNAc-peptide into disaccharide and stem peptide. It shows an alpha/beta/alpha three-layered ...This family includes N-acetylmuramoyl-L-alanine amidase (AMA) from Bacteroides uniformis and similar bacterial proteins. AmiA hydrolyses GlcNAc-1,6-anhydro-MurNAc-peptide into disaccharide and stem peptide. It shows an alpha/beta/alpha three-layered sandwich fold with a catalytic core that consists of a central five-stranded beta-sheet and four alpha-helices. It is structurally related to NlpC/P60 gamma- D-Glu-meso-diaminopimelic acid amidases [1].
Domain

InterPro: Protein Family Classification InterPro Database Homepage