4PFI | pdb_00004pfi

Crystal structure of a tRAP periplasmic solute binding protein from marinobacter aquaeolei VT8 (Maqu_2829, TARGET EFI-510133), apo open structure

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad4pfia_ Alpha and beta proteins (a/b) Periplasmic binding protein-like II Periplasmic binding protein-like II automated matches automated matches (Marinobacter nauticus VT8 ) [TaxId: 351348 ], SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ASBP_bac_1e4pfiA1 A: a/b three-layered sandwichesX: Rossmann-likeH: Glycosyl hydrolase domainT: Glycosyl hydrolase domainF: SBP_bac_1ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.40.190.170 Alpha Beta 3-Layer(aba) Sandwich D-Maltodextrin-Binding Protein domain 2CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
TRAP dicarboxylate transporter-DctP subunit- -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR018389TRAP transporter solute receptor DctPFamily
IPR038404TRAP transporter solute receptor DctP superfamilyHomologous Superfamily