Crystal structure of ABC transporter system solute-binding proteins from Aeropyrum pernix K1
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| C | SCOP2B Superfamily | Type 1 solute binding protein-like | 8091348 | 3000125 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | Type 1 solute binding protein-like | 8091348 | 3000125 | SCOP2B (2022-06-29) |
| A | SCOP2 Family | ABC transporter system solute-binding protein-like | 8050622 | 4006986 | SCOP2 (2022-06-29) |
| A | SCOP2 Superfamily | Type 1 solute binding protein-like | 8091348 | 3000125 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| C | Hemagglutinin | e4pevC1 | A: beta barrels | X: Outer membrane meander beta-barrels | H: Porins | T: Porin | F: Hemagglutinin | ECOD (v294.2) |
| B | Hemagglutinin | e4pevB1 | A: beta barrels | X: Outer membrane meander beta-barrels | H: Porins | T: Porin | F: Hemagglutinin | ECOD (v294.2) |
| A | Oxidored_nitro | e4pevA1 | A: beta barrels | X: Alpha-lytic protease prodomain-like | H: TIM barrels | T: TIM barrels | F: Oxidored_nitro | ECOD (v294.2) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| C | 3.40.50.2300 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Response regulator | CATH (4.3.0) |
| B | 3.40.50.2300 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Response regulator | CATH (4.3.0) |
| A | 3.40.50.2300 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Response regulator | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF02608 | ABC transporter substrate-binding protein PnrA-like (Bmp) | ABC transporter substrate-binding protein PnrA-like | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Membrane lipoprotein family protein | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR028082 | Periplasmic binding protein-like I | Homologous Superfamily | |
| IPR050957 | BMP Lipoprotein | Family | |
| IPR003760 | ABC transporter substrate-binding protein PnrA-like | Domain |














