4P7D | pdb_00004p7d

Antitoxin HicB3 crystal structure


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
DSCOP2B SuperfamilyTTHA1013/TTHA0281-like 8052313 3000880 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyRibbon-helix-helix 8052312 3000295 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyRibbon-helix-helix 8052312 3000295 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyTTHA1013/TTHA0281-like 8052313 3000880 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyRibbon-helix-helix 8052312 3000295 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyTTHA1013/TTHA0281-like 8052313 3000880 SCOP2B (2022-06-29)
ASCOP2 FamilyHicB antitoxin-like 8044736 4004109 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyTTHA1013/TTHA0281-like 8052313 3000880 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyRibbon-helix-helix 8052312 3000295 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
DDynamin_M,GEDe4p7dD1 A: alpha bundlesX: Middle and GTPase effector domains in dynamin-related proteinsH: Middle and GTPase effector domains in dynamin-related proteinsT: Middle and GTPase effector domains in dynamin-related proteinsF: Dynamin_M,GEDECOD (develop294)
CDynamin_M,GEDe4p7dC1 A: alpha bundlesX: Middle and GTPase effector domains in dynamin-related proteinsH: Middle and GTPase effector domains in dynamin-related proteinsT: Middle and GTPase effector domains in dynamin-related proteinsF: Dynamin_M,GEDECOD (develop294)
BPribosyltrane4p7dB1 A: alpha bundlesX: Middle and GTPase effector domains in dynamin-related proteinsH: Middle and GTPase effector domains in dynamin-related proteinsT: Middle and GTPase effector domains in dynamin-related proteinsF: PribosyltranECOD (develop294)
ADynamin_M,GEDe4p7dA1 A: alpha bundlesX: Middle and GTPase effector domains in dynamin-related proteinsH: Middle and GTPase effector domains in dynamin-related proteinsT: Middle and GTPase effector domains in dynamin-related proteinsF: Dynamin_M,GEDECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
D3.30.160.250 Alpha Beta 2-Layer Sandwich Double Stranded RNA Binding Domain CATH (4.3.0)
C3.30.160.250 Alpha Beta 2-Layer Sandwich Double Stranded RNA Binding Domain CATH (4.3.0)
B3.30.160.250 Alpha Beta 2-Layer Sandwich Double Stranded RNA Binding Domain CATH (4.3.0)
A3.30.160.250 Alpha Beta 2-Layer Sandwich Double Stranded RNA Binding Domain CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D
PF15919HicB_like antitoxin of bacterial toxin-antitoxin system (HicB_lk_antitox)HicB_like antitoxin of bacterial toxin-antitoxin systemThis is a family of HicB-like antitoxins. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D
Antitoxin HicB3 -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D
IPR035069Antitoxin HicB/UPF0150Homologous Superfamily
A, B, C, D
IPR013321Arc-type ribbon-helix-helixHomologous Superfamily
A, B, C, D
IPR031807HicB-like antitoxin of toxin-antitoxin systemDomain