Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Bd4p2ab1 All beta proteins PDZ domain-like PDZ domain-like automated matches automated matches Rat (Rattus norvegicus ) [TaxId: 10116 ], SCOPe (2.08)
Bd4p2ab2 Artifacts Tags Tags Tags N-terminal Tags Rat (Rattus norvegicus ) [TaxId: 10116 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilyVps26-like 8044659 4004065 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyArrestin/Vps26-like 8051910 3002071 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyArrestin/Vps26-like 8051911 3002071 SCOP2 (2022-06-29)
BSCOP2B SuperfamilyPDZ domain-like 8062276 3000388 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AVps26_Ce4p2aA1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Vps26_CECOD (1.6)
AVps26_Ne4p2aA2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Vps26_NECOD (1.6)
BPDZe4p2aB1 A: beta barrelsX: PDZ domain (From Topology)H: PDZ domain (From Topology)T: PDZ domainF: PDZECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A2.60.40.640 Mainly Beta Sandwich Immunoglobulin-like CATH (4.3.0)
B2.30.42.10 Mainly Beta Roll Pdz3 Domain PDZ domainCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF03643Vacuolar protein sorting-associated protein 26 (Vps26)Vacuolar protein sorting-associated protein 26- Family
PF00595PDZ domain (PDZ)PDZ domainPDZ domains are found in diverse signaling proteins.Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Vacuolar protein sorting-associated protein 26A-
Sorting nexin-27