4P1Y
Crystal structure of staphylococcal gamma-hemolysin prepore
External Resource: Annotation
- Domain Annotation: SCOP/SCOPe Classification
- Domain Annotation: SCOP2 Classification
- Domain Annotation: ECOD Classification
- Domain Annotation: CATH
- Protein Family Annotation
- Gene Ontology: Gene Product Annotation
- InterPro: Protein Family Classification
- Membrane Protein Annotation: OPM
- Membrane Protein Annotation: mpstruc
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
B | SCOP2 Family | Leukocidin (pore-forming toxin) | 8074055 | 4003101 | SCOP2 (2022-06-29) |
B | SCOP2 Superfamily | Leukocidin-like | 8074056 | 3000256 | SCOP2 (2022-06-29) |
D | SCOP2B Superfamily | Leukocidin-like | 8074056 | 3000256 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | Leukocidin-like | 8074056 | 3000256 | SCOP2B (2022-06-29) |
H | SCOP2B Superfamily | Leukocidin-like | 8074056 | 3000256 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Leukocidin | e4p1yA1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Leukocidin-like (From Topology) | T: Leukocidin-like | F: Leukocidin | ECOD (1.6) |
C | Leukocidin | e4p1yC1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Leukocidin-like (From Topology) | T: Leukocidin-like | F: Leukocidin | ECOD (1.6) |
E | Leukocidin | e4p1yE1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Leukocidin-like (From Topology) | T: Leukocidin-like | F: Leukocidin | ECOD (1.6) |
G | Leukocidin | e4p1yG1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Leukocidin-like (From Topology) | T: Leukocidin-like | F: Leukocidin | ECOD (1.6) |
B | Leukocidin | e4p1yB1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Leukocidin-like (From Topology) | T: Leukocidin-like | F: Leukocidin | ECOD (1.6) |
D | Leukocidin | e4p1yD1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Leukocidin-like (From Topology) | T: Leukocidin-like | F: Leukocidin | ECOD (1.6) |
F | Leukocidin | e4p1yF1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Leukocidin-like (From Topology) | T: Leukocidin-like | F: Leukocidin | ECOD (1.6) |
H | Leukocidin | e4p1yH1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Leukocidin-like (From Topology) | T: Leukocidin-like | F: Leukocidin | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.70.240.10 | Mainly Beta | Distorted Sandwich | Leukocidin-like | Leukocidin/porin MspA | CATH (4.3.0) |
C | 2.70.240.10 | Mainly Beta | Distorted Sandwich | Leukocidin-like | Leukocidin/porin MspA | CATH (4.3.0) |
E | 2.70.240.10 | Mainly Beta | Distorted Sandwich | Leukocidin-like | Leukocidin/porin MspA | CATH (4.3.0) |
G | 2.70.240.10 | Mainly Beta | Distorted Sandwich | Leukocidin-like | Leukocidin/porin MspA | CATH (4.3.0) |
B | 2.70.240.10 | Mainly Beta | Distorted Sandwich | Leukocidin-like | Leukocidin/porin MspA | CATH (4.3.0) |
D | 2.70.240.10 | Mainly Beta | Distorted Sandwich | Leukocidin-like | Leukocidin/porin MspA | CATH (4.3.0) |
F | 2.70.240.10 | Mainly Beta | Distorted Sandwich | Leukocidin-like | Leukocidin/porin MspA | CATH (4.3.0) |
H | 2.70.240.10 | Mainly Beta | Distorted Sandwich | Leukocidin-like | Leukocidin/porin MspA | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Gamma-hemolysin component B | - | |||
Gamma-hemolysin component A |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR016183 | Leukocidin/Hemolysin toxin | Domain | |
IPR036435 | Leukocidin/porin MspA superfamily | Homologous Superfamily | |
IPR003963 | Bi-component toxin, staphylococci | Family | |
IPR016183 | Leukocidin/Hemolysin toxin | Domain | |
IPR036435 | Leukocidin/porin MspA superfamily | Homologous Superfamily | |
IPR003963 | Bi-component toxin, staphylococci | Family |
Membrane Protein Annotation: OPM OPM Database Homepage
Chains | External Link | Type | Class | Superfamily | Family |
---|---|---|---|---|---|
OPM | Transmembrane | Beta-barrel transmembrane | Pore-forming beta-sheet toxins | Aerolysin (n=14,S=14 or n=16,S=16) |
Membrane Protein Annotation: mpstruc mpstruc Database Homepage
Chains | Resource Link | Group | Subgroup | Protein |
---|---|---|---|---|
mpstruc | TRANSMEMBRANE PROTEINS: BETA-BARREL | Adventitious Membrane Proteins: Beta-sheet Pore-forming Toxins/Attack Complexes | γ-hemolysin prepore |