4OK9
Crystal structure of the single-stranded RNA binding protein HutP from Geobacillus thermodenitrificans
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d4ok9a_ | Alpha and beta proteins (a+b) | Hut operon positive regulatory protein HutP | Hut operon positive regulatory protein HutP | Hut operon positive regulatory protein HutP | automated matches | (Geobacillus thermodenitrificans NG80-2 ) [TaxId: 420246 ], | SCOPe (2.08) |
B | d4ok9b_ | Alpha and beta proteins (a+b) | Hut operon positive regulatory protein HutP | Hut operon positive regulatory protein HutP | Hut operon positive regulatory protein HutP | automated matches | (Geobacillus thermodenitrificans NG80-2 ) [TaxId: 420246 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | Hut operon positive regulatory protein HutP | 8076681 | 4002646 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | Hut operon positive regulatory protein HutP | 8076682 | 3001538 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | Hut operon positive regulatory protein HutP | 8076682 | 3001538 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | HutP | e4ok9A1 | A: a+b three layers | X: Hut operon positive regulatory protein HutP (From Topology) | H: Hut operon positive regulatory protein HutP (From Topology) | T: Hut operon positive regulatory protein HutP | F: HutP | ECOD (1.6) |
B | HutP | e4ok9B1 | A: a+b three layers | X: Hut operon positive regulatory protein HutP (From Topology) | H: Hut operon positive regulatory protein HutP (From Topology) | T: Hut operon positive regulatory protein HutP | F: HutP | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.40.1510.10 | Alpha Beta | 3-Layer(aba) Sandwich | Hut operon positive regulatory protein HutP | Hut operon regulatory protein HutP | CATH (4.3.0) |
B | 3.40.1510.10 | Alpha Beta | 3-Layer(aba) Sandwich | Hut operon positive regulatory protein HutP | Hut operon regulatory protein HutP | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF09021 | HutP (HutP) | HutP | The HutP protein family regulates the expression of Bacillus 'hut' structural genes by an anti-termination complex, which recognises three UAG triplet units, separated by four non-conserved nucleotides on the RNA terminator region. L-histidine and Mg ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR023552 | Hut operon regulatory protein HutP, bacillales | Family | |
IPR015111 | Hut operon regulatory protein HutP | Family | |
IPR036482 | Hut operon regulatory protein HutP superfamily | Homologous Superfamily |