4OJ6 | pdb_00004oj6

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
C	Tail_spike_N	e4oj6C1	A: a/b three-layered sandwiches	X: Epidermal growth factor receptor transmembrane-juxtamembrane segment-like	H: Cytochrome c	T: Cytochrome c	F: Tail_spike_N	ECOD (v294.1)
B		e4oj6B1	A: a/b three-layered sandwiches	X: DEATH domain	H: HTH	T: winged helix domain	F:	ECOD (v294.1)
A		e4oj6A1	A: a/b three-layered sandwiches	X: DEATH domain	H: HTH	T: winged helix domain	F:	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
C	3.30.2020.50	Alpha Beta	2-Layer Sandwich	NE0471 N-terminal domain-like		CATH (4.3.0)
C	2.10.10.80	Mainly Beta	Ribbon	Seminal Fluid Protein PDC-109 (Domain B)		CATH (4.3.0)
C	2.160.20.10	Mainly Beta	3 Solenoid	Pectate Lyase C-like	Single-stranded right-handed beta-helix, Pectin lyase-like	CATH (4.3.0)
C	2.160.20.130	Mainly Beta	3 Solenoid	Pectate Lyase C-like		CATH (4.3.0)
B	3.30.2020.50	Alpha Beta	2-Layer Sandwich	NE0471 N-terminal domain-like		CATH (4.3.0)
B	2.10.10.80	Mainly Beta	Ribbon	Seminal Fluid Protein PDC-109 (Domain B)		CATH (4.3.0)
B	2.160.20.10	Mainly Beta	3 Solenoid	Pectate Lyase C-like	Single-stranded right-handed beta-helix, Pectin lyase-like	CATH (4.3.0)
B	2.160.20.130	Mainly Beta	3 Solenoid	Pectate Lyase C-like		CATH (4.3.0)
A	3.30.2020.50	Alpha Beta	2-Layer Sandwich	NE0471 N-terminal domain-like		CATH (4.3.0)
A	2.10.10.80	Mainly Beta	Ribbon	Seminal Fluid Protein PDC-109 (Domain B)		CATH (4.3.0)
A	2.160.20.10	Mainly Beta	3 Solenoid	Pectate Lyase C-like	Single-stranded right-handed beta-helix, Pectin lyase-like	CATH (4.3.0)
A	2.160.20.130	Mainly Beta	3 Solenoid	Pectate Lyase C-like		CATH (4.3.0)

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C	Tailspike protein	cation binding ion binding binding metal ion binding small molecule binding	biological process involved in interspecies interaction between organisms biological process involved in interaction with host biological process involved in symbiotic interaction viral process viral life cycle	virion component

Chains	Accession	Name	Type
A, B, C	IPR012334	Pectin lyase fold	Homologous Superfamily
A, B, C	IPR040775	Tail spike TSP1/Gp66, N-terminal domain	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

.id_divider{ color: #ccc; padding: 0 10px 0 10px; } .extended_id_info{ color: #ccc; font-size: 18px; position: relative; top: -10px; left: 4px; } 4OJ6 | pdb_00004oj6