Crystal structure of the Type II-C Cas9 enzyme from Actinomyces naeslundii
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | QSOX_Trx1 | e4ogeA1 | A: beta barrels | X: Four-helical up-and-down bundle | H: FAD-dependent thiol oxidase | T: FAD-dependent thiol oxidase | F: QSOX_Trx1 | ECOD (v294.2) |
| A | FAN1_HTH | e4ogeA2 | A: beta barrels | X: Inserted helical domain in fatty acid synthase subunit beta | H: Voltage-gated ion channels | T: Voltage-gated ion channels | F: FAN1_HTH | ECOD (v294.2) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 3.30.420.10 | Alpha Beta | 2-Layer Sandwich | Nucleotidyltransferase | domain 5 | CATH (4.3.0) |
| A | 3.30.70.3520 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | CATH (4.3.0) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| HNH endonuclease domain protein | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR040619 | Cas9, alpha-helical lobe domain | Domain | |
| IPR036397 | Ribonuclease H superfamily | Homologous Superfamily | |
| IPR041225 | Cas9, topo homolgy domain | Domain | |
| IPR033114 | Cas9-type HNH domain | Domain | |
| IPR040796 | CRISPR-associated endonuclease Cas9, beta-hairpin domain | Domain | |
| IPR041383 | RuvC endonuclease subdomain 3 | Domain | |
| IPR028629 | CRISPR-associated endonuclease Cas9 | Family | |
| IPR003615 | HNH nuclease | Domain | |
| IPR002711 | HNH endonuclease | Domain | |
| IPR041217 | Cas9 C-terminal domain | Domain |














