4O8L

Structure of sortase A from Streptococcus pneumoniae

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Protein Modification Annotation

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	Sortase	8100118	3000481	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Sortase	8100118	3000481	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Sortase	8100118	3000481	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Sortase	8100118	3000481	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	PF04203	e4o8lA1	A: beta barrels	X: Sortase (From Topology)	H: Sortase (From Topology)	T: Sortase	F: PF04203	ECOD (1.6)
C	PF04203	e4o8lC1	A: beta barrels	X: Sortase (From Topology)	H: Sortase (From Topology)	T: Sortase	F: PF04203	ECOD (1.6)
D	PF04203	e4o8lD1	A: beta barrels	X: Sortase (From Topology)	H: Sortase (From Topology)	T: Sortase	F: PF04203	ECOD (1.6)
B	PF04203	e4o8lB1	A: beta barrels	X: Sortase (From Topology)	H: Sortase (From Topology)	T: Sortase	F: PF04203	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	2.40.260.10	Mainly Beta	Beta Barrel	Sortase	Chain: A	CATH (4.3.0)
C	2.40.260.10	Mainly Beta	Beta Barrel	Sortase	Chain: A	CATH (4.3.0)
D	2.40.260.10	Mainly Beta	Beta Barrel	Sortase	Chain: A	CATH (4.3.0)
B	2.40.260.10	Mainly Beta	Beta Barrel	Sortase	Chain: A	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, C, D	PF04203	Sortase domain (Sortase)	Sortase domain	The founder member of this family is S. aureus sortase, a transpeptidase that attaches surface proteins by the threonine of an LPXTG motif to the cell wall [1].	Domain
B	PF04203	Sortase domain (Sortase)	Sortase domain	The founder member of this family is S. aureus sortase, a transpeptidase that attaches surface proteins by the threonine of an LPXTG motif to the cell wall [1].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, C, D	Sortase	cysteine-type peptidase activity peptidase activity catalytic activity, acting on a protein hydrolase activity catalytic activity	organic substance metabolic process organonitrogen compound metabolic process proteolysis metabolic process primary metabolic process protein metabolic process macromolecule metabolic process	-
B	Sortase	cysteine-type peptidase activity peptidase activity catalytic activity, acting on a protein hydrolase activity catalytic activity	organic substance metabolic process organonitrogen compound metabolic process proteolysis metabolic process primary metabolic process protein metabolic process macromolecule metabolic process	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, C, D	IPR023365	Sortase domain superfamily	Homologous Superfamily
A, C, D	IPR042007	Sortase A	Family
A, C, D	IPR005754	Sortase family	Family
B	IPR023365	Sortase domain superfamily	Homologous Superfamily
B	IPR042007	Sortase A	Family
B	IPR005754	Sortase family	Family

Protein Modification Annotation

Modified Residue(s)
Chain	Residue(s)	Description
B	CSO	Parent Component: CYS RESID: AA0205 PSI-MOD : L-cysteine sulfenic acid MOD:00210

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.