4O64
Zinc fingers of KDM2B
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2 Family | PHD domain | 8046271 | 4003778 | SCOP2 (2022-06-29) |
A | SCOP2 Family | CXXC zinc-finger domain | 8049709 | 4006601 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | FYVE/PHD zinc finger | 8053014 | 3001459 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | CXXC zinc-finger domain | 8053013 | 3002156 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | FYVE/PHD zinc finger | 8053014 | 3001459 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | CXXC zinc-finger domain | 8053013 | 3002156 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | FYVE/PHD zinc finger | 8053014 | 3001459 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | CXXC zinc-finger domain | 8053013 | 3002156 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF02008 | e4o64A1 | A: few secondary structure elements | X: CXXC domain-like | H: CXXC domain (From Topology) | T: CXXC domain | F: PF02008 | ECOD (1.6) |
A | PF16866 | e4o64A2 | A: few secondary structure elements | X: RING/U-box-like | H: RING/U-box-like | T: FYVE/PHD zinc finger | F: PF16866 | ECOD (1.6) |
B | PF02008 | e4o64B2 | A: few secondary structure elements | X: CXXC domain-like | H: CXXC domain (From Topology) | T: CXXC domain | F: PF02008 | ECOD (1.6) |
B | PF16866 | e4o64B1 | A: few secondary structure elements | X: RING/U-box-like | H: RING/U-box-like | T: FYVE/PHD zinc finger | F: PF16866 | ECOD (1.6) |
C | PF02008 | e4o64C2 | A: few secondary structure elements | X: CXXC domain-like | H: CXXC domain (From Topology) | T: CXXC domain | F: PF02008 | ECOD (1.6) |
C | PF16866 | e4o64C1 | A: few secondary structure elements | X: RING/U-box-like | H: RING/U-box-like | T: FYVE/PHD zinc finger | F: PF16866 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 3.30.40.10 | Alpha Beta | 2-Layer Sandwich | Herpes Virus-1 | Zinc/RING finger domain, C3HC4 (zinc finger) | CATH (4.3.0) |
B | 3.30.40.10 | Alpha Beta | 2-Layer Sandwich | Herpes Virus-1 | Zinc/RING finger domain, C3HC4 (zinc finger) | CATH (4.3.0) |
C | 3.30.40.10 | Alpha Beta | 2-Layer Sandwich | Herpes Virus-1 | Zinc/RING finger domain, C3HC4 (zinc finger) | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF02008 | CXXC zinc finger domain (zf-CXXC) | CXXC zinc finger domain | This domain contains eight conserved cysteine residues that bind to two zinc ions. The CXXC domain is found in a variety of chromatin-associated proteins. This domain binds to nonmethyl-CpG dinucleotides. The domain is characterised by two repeats [ ... | Domain | |
PF16866 | PHD-finger (PHD_4) | PHD-finger | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR001965 | Zinc finger, PHD-type | Domain | |
IPR001810 | F-box domain | Domain | |
IPR003347 | JmjC domain | Domain | |
IPR041070 | Jumonji, helical domain | Domain | |
IPR041667 | Cupin-like domain 8 | Domain | |
IPR002857 | Zinc finger, CXXC-type | Domain | |
IPR019787 | Zinc finger, PHD-finger | Domain | |
IPR011011 | Zinc finger, FYVE/PHD-type | Homologous Superfamily | |
IPR013083 | Zinc finger, RING/FYVE/PHD-type | Homologous Superfamily | |
IPR032675 | Leucine-rich repeat domain superfamily | Homologous Superfamily | |
IPR006553 | Leucine-rich repeat, cysteine-containing subtype | Repeat |
Pharos: Disease Associations Pharos Homepage Annotation
Chains | Drug Target   | Associated Disease |
---|---|---|
Q8NHM5 | :