4NMU | pdb_00004nmu

Crystal Structure of Thiol-disulfide Oxidoreductase from Bacillus str. 'Ames Ancestor'

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
D	d4nmud_	Alpha and beta proteins (a/b)	Thioredoxin fold	Thioredoxin-like	automated matches	automated matches	anthrax,anthrax bacterium (Bacillus anthracis ) [TaxId: 1392 ],	SCOPe (2.08)
C	d4nmuc1	Alpha and beta proteins (a/b)	Thioredoxin fold	Thioredoxin-like	automated matches	automated matches	anthrax,anthrax bacterium (Bacillus anthracis ) [TaxId: 1392 ],	SCOPe (2.08)
C	d4nmuc2	Artifacts	Tags	Tags	Tags	N-terminal Tags	anthrax,anthrax bacterium (Bacillus anthracis ) [TaxId: 1392 ],	SCOPe (2.08)
B	d4nmub_	Alpha and beta proteins (a/b)	Thioredoxin fold	Thioredoxin-like	automated matches	automated matches	anthrax,anthrax bacterium (Bacillus anthracis ) [TaxId: 1392 ],	SCOPe (2.08)
A	d4nmua1	Alpha and beta proteins (a/b)	Thioredoxin fold	Thioredoxin-like	automated matches	automated matches	anthrax,anthrax bacterium (Bacillus anthracis ) [TaxId: 1392 ],	SCOPe (2.08)
A	d4nmua2	Artifacts	Tags	Tags	Tags	N-terminal Tags	anthrax,anthrax bacterium (Bacillus anthracis ) [TaxId: 1392 ],	SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D	OMPdecase	e4nmuD1	A: a/b three-layered sandwiches	X: beta-Grasp	H: Ubiquitin-related	T: Ubiquitin-like	F: OMPdecase	ECOD (v294.1)
C	OMPdecase	e4nmuC1	A: a/b three-layered sandwiches	X: beta-Grasp	H: Ubiquitin-related	T: Ubiquitin-like	F: OMPdecase	ECOD (v294.1)
B	OMPdecase	e4nmuB1	A: a/b three-layered sandwiches	X: beta-Grasp	H: Ubiquitin-related	T: Ubiquitin-like	F: OMPdecase	ECOD (v294.1)
A	RF-1	e4nmuA1	A: a/b three-layered sandwiches	X: dsRBD-like	H: Peptidyl-tRNA hydrolase domain-like	T: Peptidyl-tRNA hydrolase domain-like	F: RF-1	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
D	3.40.30.10	Alpha Beta	3-Layer(aba) Sandwich	Glutaredoxin	Glutaredoxin	CATH (4.3.0)
C	3.40.30.10	Alpha Beta	3-Layer(aba) Sandwich	Glutaredoxin	Glutaredoxin	CATH (4.3.0)
B	3.40.30.10	Alpha Beta	3-Layer(aba) Sandwich	Glutaredoxin	Glutaredoxin	CATH (4.3.0)
A	3.40.30.10	Alpha Beta	3-Layer(aba) Sandwich	Glutaredoxin	Glutaredoxin	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D	PF00578	AhpC/TSA family (AhpC-TSA)	AhpC/TSA family	This family contains proteins related to alkyl hydroperoxide reductase (AhpC) and thiol specific antioxidant (TSA).	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	Thiol-disulfide oxidoreductase ResA	antioxidant activity oxidoreductase activity, acting on a sulfur group of donors disulfide oxidoreductase activity oxidoreductase activity catalytic activity	cytochrome complex assembly cellular component organization cellular component biogenesis cellular component assembly protein-containing complex organization protein-containing complex assembly cellular process cellular component organization or biogenesis	cell periphery cellular anatomical structure plasma membrane membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR023555	Thiol-disulphide oxidoreductase ResA	Family
A, B, C, D	IPR013766	Thioredoxin domain	Domain
A, B, C, D	IPR036249	Thioredoxin-like superfamily	Homologous Superfamily
A, B, C, D	IPR000866	Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant	Domain
A, B, C, D	IPR050553	Thioredoxin family ResA/DsbE subfamily	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.