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 4NKO | pdb_00004nko

Crystal structure of engineered anti-EE scFv antibody fragment

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
CZP-Ne4nkoC1 A: alpha arraysX: Single-stranded left-handed beta-helixH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: ZP-NECOD (v295.2)
BZP-Ne4nkoB1 A: alpha arraysX: Single-stranded left-handed beta-helixH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: ZP-NECOD (v295.2)
AZP-Ne4nkoA1 A: alpha arraysX: Single-stranded left-handed beta-helixH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: ZP-NECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
C2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
A2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)

IMGT Antibody Annotation IMGT Database Homepage

ChainProtein NameDescriptionOrganism NameGene Allele Name(s)Domain Name(s)Receptor TypeReceptor DescriptionProvenance Source
A, B, C
Engineered scFv V-KAPPA Mus musculus (house mouse) IGKV1-117*01, IGKJ5*01 V-DOMAIN V-KAPPA IG FV-HEAVY_KAPPA IMGT (202639-0)

SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
A, B, C
Light ChainIGKV1 Kappa-SAbDab (2026-10-09)