Crystal structure of H5 hemagglutinin mutant (N158D, N224K and Q226L) from the influenza virus A/Viet Nam/1203/2004 (H5N1)
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| AA [auth X] | SCOP2B Superfamily | Influenza hemagglutinin (stalk) | 8087922 | 3001616 | SCOP2B (2022-06-29) |
| BA [auth Z] | SCOP2B Superfamily | Influenza hemagglutinin (stalk) | 8087922 | 3001616 | SCOP2B (2022-06-29) |
| CA [auth b] | SCOP2B Superfamily | Influenza hemagglutinin (stalk) | 8087922 | 3001616 | SCOP2B (2022-06-29) |
| DA [auth d] | SCOP2B Superfamily | Influenza hemagglutinin (stalk) | 8087922 | 3001616 | SCOP2B (2022-06-29) |
| P [auth B] | SCOP2B Superfamily | Influenza hemagglutinin (stalk) | 8087922 | 3001616 | SCOP2B (2022-06-29) |
| R [auth F] | SCOP2B Superfamily | Influenza hemagglutinin (stalk) | 8087922 | 3001616 | SCOP2B (2022-06-29) |
| T [auth J] | SCOP2B Superfamily | Influenza hemagglutinin (stalk) | 8087922 | 3001616 | SCOP2B (2022-06-29) |
| V [auth N] | SCOP2B Superfamily | Influenza hemagglutinin (stalk) | 8087922 | 3001616 | SCOP2B (2022-06-29) |
| W [auth P] | SCOP2B Superfamily | Influenza hemagglutinin (stalk) | 8087922 | 3001616 | SCOP2B (2022-06-29) |
| X [auth R] | SCOP2B Superfamily | Influenza hemagglutinin (stalk) | 8087922 | 3001616 | SCOP2B (2022-06-29) |
| Y [auth T] | SCOP2B Superfamily | Influenza hemagglutinin (stalk) | 8087922 | 3001616 | SCOP2B (2022-06-29) |
| Z [auth V] | SCOP2B Superfamily | Influenza hemagglutinin (stalk) | 8087922 | 3001616 | SCOP2B (2022-06-29) |
| U [auth L] | SCOP2B Superfamily | Influenza hemagglutinin (stalk) | 8087922 | 3001616 | SCOP2B (2022-06-29) |
| S [auth H] | SCOP2B Superfamily | Influenza hemagglutinin (stalk) | 8087922 | 3001616 | SCOP2B (2022-06-29) |
| Q [auth D] | SCOP2B Superfamily | Influenza hemagglutinin (stalk) | 8087922 | 3001616 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | HLH | e4n5yA1 | A: a/b three-layered sandwiches | X: Suppressor of Fused, C-terminal domain | H: HTH | T: HLH, helix-loop-helix DNA-binding domain | F: HLH | ECOD (v294.1) |
| B [auth C] | HLH | e4n5yC1 | A: a/b three-layered sandwiches | X: Suppressor of Fused, C-terminal domain | H: HTH | T: HLH, helix-loop-helix DNA-binding domain | F: HLH | ECOD (v294.1) |
| C [auth E] | HLH | e4n5yE1 | A: a/b three-layered sandwiches | X: Suppressor of Fused, C-terminal domain | H: HTH | T: HLH, helix-loop-helix DNA-binding domain | F: HLH | ECOD (v294.1) |
| D [auth G] | HLH | e4n5yG1 | A: a/b three-layered sandwiches | X: Suppressor of Fused, C-terminal domain | H: HTH | T: HLH, helix-loop-helix DNA-binding domain | F: HLH | ECOD (v294.1) |
| E [auth I] | HLH | e4n5yI1 | A: a/b three-layered sandwiches | X: Suppressor of Fused, C-terminal domain | H: HTH | T: HLH, helix-loop-helix DNA-binding domain | F: HLH | ECOD (v294.1) |
| F [auth K] | HLH | e4n5yK1 | A: a/b three-layered sandwiches | X: Suppressor of Fused, C-terminal domain | H: HTH | T: HLH, helix-loop-helix DNA-binding domain | F: HLH | ECOD (v294.1) |
| G [auth M] | HLH | e4n5yM1 | A: a/b three-layered sandwiches | X: Suppressor of Fused, C-terminal domain | H: HTH | T: HLH, helix-loop-helix DNA-binding domain | F: HLH | ECOD (v294.1) |
| H [auth O] | HLH | e4n5yO1 | A: a/b three-layered sandwiches | X: Suppressor of Fused, C-terminal domain | H: HTH | T: HLH, helix-loop-helix DNA-binding domain | F: HLH | ECOD (v294.1) |
| I [auth Q] | HLH | e4n5yQ1 | A: a/b three-layered sandwiches | X: Suppressor of Fused, C-terminal domain | H: HTH | T: HLH, helix-loop-helix DNA-binding domain | F: HLH | ECOD (v294.1) |
| J [auth S] | HLH | e4n5yS1 | A: a/b three-layered sandwiches | X: Suppressor of Fused, C-terminal domain | H: HTH | T: HLH, helix-loop-helix DNA-binding domain | F: HLH | ECOD (v294.1) |
| K [auth U] | HLH | e4n5yU1 | A: a/b three-layered sandwiches | X: Suppressor of Fused, C-terminal domain | H: HTH | T: HLH, helix-loop-helix DNA-binding domain | F: HLH | ECOD (v294.1) |
| L [auth W] | HLH | e4n5yW1 | A: a/b three-layered sandwiches | X: Suppressor of Fused, C-terminal domain | H: HTH | T: HLH, helix-loop-helix DNA-binding domain | F: HLH | ECOD (v294.1) |
| N [auth a] | HLH | e4n5ya1 | A: a/b three-layered sandwiches | X: Suppressor of Fused, C-terminal domain | H: HTH | T: HLH, helix-loop-helix DNA-binding domain | F: HLH | ECOD (v294.1) |
| O [auth c] | HLH | e4n5yc1 | A: a/b three-layered sandwiches | X: Suppressor of Fused, C-terminal domain | H: HTH | T: HLH, helix-loop-helix DNA-binding domain | F: HLH | ECOD (v294.1) |
| M [auth Y] | HLH | e4n5yY1 | A: a/b three-layered sandwiches | X: Suppressor of Fused, C-terminal domain | H: HTH | T: HLH, helix-loop-helix DNA-binding domain | F: HLH | ECOD (v294.1) |
Domain Annotation: CATH CATH Database Homepage
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR001364 | Haemagglutinin, influenzavirus A/B | Family | |
| IPR008980 | Viral capsid/haemagglutinin protein | Homologous Superfamily | |
| IPR000149 | Haemagglutinin, influenzavirus A | Family | |
| IPR013828 | Haemagglutinin, HA1 chain, alpha/beta domain superfamily | Homologous Superfamily | |
| IPR001364 | Haemagglutinin, influenzavirus A/B | Family | |
| IPR008980 | Viral capsid/haemagglutinin protein | Homologous Superfamily | |
| IPR000149 | Haemagglutinin, influenzavirus A | Family | |
| IPR013828 | Haemagglutinin, HA1 chain, alpha/beta domain superfamily | Homologous Superfamily |
