4N23 | pdb_00004n23

Crystal structure of the GP2 Core Domain from the California Academy of Science Virus, monoclinic symmetry

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d4n23a1	Coiled coil proteins	Stalk segment of viral fusion proteins	Virus ectodomain	automated matches	automated matches	(CAS virus ) [TaxId: 1223561 ],	SCOPe (2.08)
A	d4n23a2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(CAS virus ) [TaxId: 1223561 ],	SCOPe (2.08)
B	d4n23b1	Coiled coil proteins	Stalk segment of viral fusion proteins	Virus ectodomain	automated matches	automated matches	(CAS virus ) [TaxId: 1223561 ],	SCOPe (2.08)
B	d4n23b2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(CAS virus ) [TaxId: 1223561 ],	SCOPe (2.08)
C	d4n23c1	Coiled coil proteins	Stalk segment of viral fusion proteins	Virus ectodomain	automated matches	automated matches	(CAS virus ) [TaxId: 1223561 ],	SCOPe (2.08)
C	d4n23c2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(CAS virus ) [TaxId: 1223561 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2B Superfamily	Virus ectodomain	8084395	3001628	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Virus ectodomain	8084395	3001628	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Virus ectodomain	8084395	3001628	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	UNK_F_TYPE	e4n23A1	A: a+b duplicates or obligate multimers	X: Envelope glycoprotein GP2-related (From Topology)	H: Envelope glycoprotein GP2-related (From Topology)	T: Envelope glycoprotein GP2-related	F: UNK_F_TYPE	ECOD (1.6)
B	UNK_F_TYPE	e4n23B1	A: a+b duplicates or obligate multimers	X: Envelope glycoprotein GP2-related (From Topology)	H: Envelope glycoprotein GP2-related (From Topology)	T: Envelope glycoprotein GP2-related	F: UNK_F_TYPE	ECOD (1.6)
C	UNK_F_TYPE	e4n23C1	A: a+b duplicates or obligate multimers	X: Envelope glycoprotein GP2-related (From Topology)	H: Envelope glycoprotein GP2-related (From Topology)	T: Envelope glycoprotein GP2-related	F: UNK_F_TYPE	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	1.10.287.210	Mainly Alpha	Orthogonal Bundle	Helix Hairpins		CATH (4.2.0)
B	1.10.287.210	Mainly Alpha	Orthogonal Bundle	Helix Hairpins		CATH (4.2.0)
C	1.10.287.210	Mainly Alpha	Orthogonal Bundle	Helix Hairpins		CATH (4.2.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C	GP2 Ectodomain	identical protein binding protein binding binding	-	cellular anatomical structure membrane host cell plasma membrane host cellular component host cell part host cell membrane other organism part

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C	IPR018154	TLV/ENV coat polyprotein	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.