4MZ9
Revised structure of E. coli SSB
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d4mz9a_ | All beta proteins | OB-fold | Nucleic acid-binding proteins | Single strand DNA-binding domain, SSB | ssDNA-binding protein | (Escherichia coli K-12 ) [TaxId: 83333 ], | SCOPe (2.08) |
B | d4mz9b_ | All beta proteins | OB-fold | Nucleic acid-binding proteins | Single strand DNA-binding domain, SSB | ssDNA-binding protein | (Escherichia coli K-12 ) [TaxId: 83333 ], | SCOPe (2.08) |
C | d4mz9c_ | All beta proteins | OB-fold | Nucleic acid-binding proteins | Single strand DNA-binding domain, SSB | ssDNA-binding protein | (Escherichia coli K-12 ) [TaxId: 83333 ], | SCOPe (2.08) |
D | d4mz9d_ | All beta proteins | OB-fold | Nucleic acid-binding proteins | Single strand DNA-binding domain, SSB | ssDNA-binding protein | (Escherichia coli K-12 ) [TaxId: 83333 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | SSB | e4mz9A1 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: SSB | ECOD (1.6) |
B | SSB | e4mz9B1 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: SSB | ECOD (1.6) |
C | SSB | e4mz9C1 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: SSB | ECOD (1.6) |
D | SSB | e4mz9D1 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: SSB | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.40.50.140 | Mainly Beta | Beta Barrel | OB fold (Dihydrolipoamide Acetyltransferase, E2P) | Nucleic acid-binding proteins | CATH (4.3.0) |
B | 2.40.50.140 | Mainly Beta | Beta Barrel | OB fold (Dihydrolipoamide Acetyltransferase, E2P) | Nucleic acid-binding proteins | CATH (4.3.0) |
C | 2.40.50.140 | Mainly Beta | Beta Barrel | OB fold (Dihydrolipoamide Acetyltransferase, E2P) | Nucleic acid-binding proteins | CATH (4.3.0) |
D | 2.40.50.140 | Mainly Beta | Beta Barrel | OB fold (Dihydrolipoamide Acetyltransferase, E2P) | Nucleic acid-binding proteins | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00436 | Single-strand binding protein family (SSB) | Single-strand binding protein family | This family includes single stranded binding proteins and also the primosomal replication protein N (PriB). PriB forms a complex with PriA, PriC and ssDNA. | Domain |