4MR0

Crystal structure of PfbA, a surface adhesin of Streptococcus pneumoniae

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
AGlyco_hydro_28e4mr0A1 A: beta duplicates or obligate multimersX: Single-stranded right-handed beta-helixH: Pectin lyase-like (From Topology)T: Pectin lyase-likeF: Glyco_hydro_28ECOD (1.6)
BGlyco_hydro_28e4mr0B1 A: beta duplicates or obligate multimersX: Single-stranded right-handed beta-helixH: Pectin lyase-like (From Topology)T: Pectin lyase-likeF: Glyco_hydro_28ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A2.160.20.10 Mainly Beta 3 Solenoid Pectate Lyase C-like Single-stranded right-handed beta-helix, Pectin lyase-likeCATH (4.3.0)
B2.160.20.10 Mainly Beta 3 Solenoid Pectate Lyase C-like Single-stranded right-handed beta-helix, Pectin lyase-likeCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF13229Right handed beta helix region (Beta_helix)Right handed beta helix region- Repeat
A, B
PF12708Pectate lyase superfamily protein (Pectate_lyase_3)Pectate lyase superfamily protein- Repeat

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
Plasmin and fibronectin-binding protein A- -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR006626Parallel beta-helix repeatRepeat
A, B
IPR012334Pectin lyase foldHomologous Superfamily
A, B
IPR005877YSIRK Gram-positive signal peptideDomain
A, B
IPR039448Right handed beta helix domainDomain
A, B
IPR024535Pectate lyase superfamily proteinDomain
A, B
IPR019931LPXTG cell wall anchor domainDomain
A, B
IPR011050Pectin lyase fold/virulence factorHomologous Superfamily