4MIV | pdb_00004miv

Crystal Structure of Sulfamidase, Crystal Form L

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
H	SCOP2B Superfamily	Arylsulfatase, C-terminal domain-like	8090531	3002305	SCOP2B (2022-06-29)
H	SCOP2B Superfamily	Alkaline phosphatase-like	8090530	3001353	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	Arylsulfatase, C-terminal domain-like	8090531	3002305	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	Alkaline phosphatase-like	8090530	3001353	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	Arylsulfatase, C-terminal domain-like	8090531	3002305	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	Alkaline phosphatase-like	8090530	3001353	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	Alkaline phosphatase-like	8090530	3001353	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	Arylsulfatase, C-terminal domain-like	8090531	3002305	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Arylsulfatase, C-terminal domain-like	8090531	3002305	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Alkaline phosphatase-like	8090530	3001353	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Arylsulfatase, C-terminal domain-like	8090531	3002305	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Alkaline phosphatase-like	8090530	3001353	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Alkaline phosphatase-like	8090530	3001353	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Arylsulfatase, C-terminal domain-like	8090531	3002305	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Alkaline phosphatase-like	8090530	3001353	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Arylsulfatase, C-terminal domain-like	8090531	3002305	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
H	Phosphodiest, Metalloenzyme	e4mivH1	A: a/b three-layered sandwiches	X: Rubredoxin-like	H: Rubredoxin-related	T: Rubredoxin-related	F: Phosphodiest, Metalloenzyme	ECOD (v294.1)
G	Hormone_recep	e4mivG1	A: a/b three-layered sandwiches	X: Histone-like	H: Histone-related	T: AAA+ ATPase lid domain	F: Hormone_recep	ECOD (v294.1)
F	Hormone_recep	e4mivF1	A: a/b three-layered sandwiches	X: Histone-like	H: Histone-related	T: AAA+ ATPase lid domain	F: Hormone_recep	ECOD (v294.1)
E	Phosphodiest, Metalloenzyme	e4mivE1	A: a/b three-layered sandwiches	X: Rubredoxin-like	H: Rubredoxin-related	T: Rubredoxin-related	F: Phosphodiest, Metalloenzyme	ECOD (v294.1)
D	Hormone_recep	e4mivD1	A: a/b three-layered sandwiches	X: Histone-like	H: Histone-related	T: AAA+ ATPase lid domain	F: Hormone_recep	ECOD (v294.1)
C	Phosphodiest, Metalloenzyme	e4mivC1	A: a/b three-layered sandwiches	X: Rubredoxin-like	H: Rubredoxin-related	T: Rubredoxin-related	F: Phosphodiest, Metalloenzyme	ECOD (v294.1)
B	Phosphodiest, Metalloenzyme	e4mivB1	A: a/b three-layered sandwiches	X: Rubredoxin-like	H: Rubredoxin-related	T: Rubredoxin-related	F: Phosphodiest, Metalloenzyme	ECOD (v294.1)
A	Phosphodiest, Metalloenzyme	e4mivA1	A: a/b three-layered sandwiches	X: Rubredoxin-like	H: Rubredoxin-related	T: Rubredoxin-related	F: Phosphodiest, Metalloenzyme	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
H	3.40.720.10	Alpha Beta	3-Layer(aba) Sandwich	Alkaline Phosphatase, subunit A	Alkaline Phosphatase, subunit A	CATH (4.3.0)
G	3.40.720.10	Alpha Beta	3-Layer(aba) Sandwich	Alkaline Phosphatase, subunit A	Alkaline Phosphatase, subunit A	CATH (4.3.0)
F	3.40.720.10	Alpha Beta	3-Layer(aba) Sandwich	Alkaline Phosphatase, subunit A	Alkaline Phosphatase, subunit A	CATH (4.3.0)
E	3.40.720.10	Alpha Beta	3-Layer(aba) Sandwich	Alkaline Phosphatase, subunit A	Alkaline Phosphatase, subunit A	CATH (4.3.0)
D	3.40.720.10	Alpha Beta	3-Layer(aba) Sandwich	Alkaline Phosphatase, subunit A	Alkaline Phosphatase, subunit A	CATH (4.3.0)
C	3.40.720.10	Alpha Beta	3-Layer(aba) Sandwich	Alkaline Phosphatase, subunit A	Alkaline Phosphatase, subunit A	CATH (4.3.0)
B	3.40.720.10	Alpha Beta	3-Layer(aba) Sandwich	Alkaline Phosphatase, subunit A	Alkaline Phosphatase, subunit A	CATH (4.3.0)
A	3.40.720.10	Alpha Beta	3-Layer(aba) Sandwich	Alkaline Phosphatase, subunit A	Alkaline Phosphatase, subunit A	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F, G, H	PF16347	N-sulphoglucosamine sulphohydrolase, C-terminal (SGSH_C)	N-sulphoglucosamine sulphohydrolase, C-terminal	-	Family
A, B, C, D, E A, B, C, D, E, F, G, H	PF00884	Sulfatase (Sulfatase)	Sulfatase	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G, H	N-sulphoglucosamine sulphohydrolase	hydrolase activity, acting on ester bonds hydrolase activity catalytic activity sulfuric ester hydrolase activity N-sulfoglucosamine sulfohydrolase activity hydrolase activity, acting on sulfur-nitrogen bonds cation binding ion binding binding metal ion binding small molecule binding	carbohydrate derivative catabolic process catabolic process glycosaminoglycan metabolic process carbohydrate derivative metabolic process aminoglycan catabolic process macromolecule catabolic process glycosaminoglycan catabolic process aminoglycan metabolic process metabolic process cellular process macromolecule metabolic process multicellular organismal process determination of adult lifespan glycoprotein catabolic process carbohydrate derivative catabolic process catabolic process glycosaminoglycan metabolic process carbohydrate derivative metabolic process aminoglycan catabolic process macromolecule catabolic process glycosaminoglycan catabolic process aminoglycan metabolic process metabolic process cellular process macromolecule metabolic process multicellular organismal process determination of adult lifespan glycoprotein catabolic process heparan sulfate proteoglycan metabolic process primary metabolic process protein catabolic process glycoprotein metabolic process heparan sulfate proteoglycan catabolic process protein metabolic process proteoglycan catabolic process proteoglycan metabolic process behavior motor behavior	membrane-bounded organelle intracellular anatomical structure membrane-enclosed lumen lytic vacuole vacuolar lumen vacuole intracellular membrane-bounded organelle lysosomal lumen intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle cytoplasm membrane-bounded organelle intracellular anatomical structure membrane-enclosed lumen lytic vacuole vacuolar lumen vacuole intracellular membrane-bounded organelle lysosomal lumen intracellular organelle lumen intracellular organelle cellular anatomical structure organelle lumen organelle cytoplasm lysosome extracellular exosome extracellular vesicle extracellular organelle extracellular region vesicle extracellular membrane-bounded organelle

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H	IPR032506	N-sulphoglucosamine sulphohydrolase, C-terminal	Domain
A, B, C, D, E A, B, C, D, E, F, G, H	IPR024607	Sulfatase, conserved site	Conserved Site
A, B, C, D, E A, B, C, D, E, F, G, H	IPR000917	Sulfatase, N-terminal	Domain
A, B, C, D, E A, B, C, D, E, F, G, H	IPR017850	Alkaline-phosphatase-like, core domain superfamily	Homologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A, B, C, D, E A, B, C, D, E, F, G, H	Pharos: P51688	mucopolysaccharidosis type 3 Sanfilippo syndrome type A Sanfilippo syndrome type C Sanfilippo syndrome type D mucopolysaccharidosis Sanfilippo syndrome type B atypical teratoid rhabdoid tumor inborn errors of metabolism malignant mesothelioma psoriasis Hallermann-Streiff syndrome intellectual disability medulloblastoma ovarian cancer Hyperammonemia mucopolysaccharidosis type 3 Sanfilippo syndrome type A Sanfilippo syndrome type C Sanfilippo syndrome type D mucopolysaccharidosis Sanfilippo syndrome type B atypical teratoid rhabdoid tumor inborn errors of metabolism malignant mesothelioma psoriasis Hallermann-Streiff syndrome intellectual disability medulloblastoma ovarian cancer Hyperammonemia lysosomal storage disease pilocytic astrocytoma subependymal giant cell astrocytoma

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.