4LS9 | pdb_00004ls9

Structure of mycobacterial nrnA homolog reveals multifunctional nuclease activities


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
Be4ls9B1 A: Immunoglobulin-like beta-sandwichX: Ribosomal protein L14-relatedH: Ribosomal protein L14-relatedT: Abhydrolase_3F:ECOD (20:10:01)
Ae4ls9A1 A: alpha/beta-HydrolasesX: alpha/beta-HydrolasesH: alpha/beta-HydrolasesT: RVPF:ECOD (20:10:01)

Domain Annotation: CATH CATH Database Homepage

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B
PF02272DHHA1 domain (DHHA1)DHHA1 domainThis domain is often found adjacent to the DHH domain Pfam:PF01368 and is called DHHA1 for DHH associated domain. This domain is diagnostic of DHH subfamily 1 members [1]. This domain is also found in alanyl tRNA synthetase e.g. Swiss:P00957, suggest ...This domain is often found adjacent to the DHH domain Pfam:PF01368 and is called DHHA1 for DHH associated domain. This domain is diagnostic of DHH subfamily 1 members [1]. This domain is also found in alanyl tRNA synthetase e.g. Swiss:P00957, suggesting that this domain may have an RNA binding function. The domain is about 60 residues long and contains a conserved GG motif.
Domain
A, B
PF01368DHH family, N-terminal domain (DHH)DHH family, N-terminal domainIt is predicted that this family of proteins all perform a phosphoesterase function. This domain is found at the N-terminal of the single stranded DNA exonuclease RecJ. It shows an alpha-beta configuration [2]. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
DHH family protein - -