4LRJ | pdb_00004lrj

Bacterial Effector NleH1 Kinase Domain with AMPPNP and Mg2+

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	PK	e4lrjB1	A: a/b three-layered sandwiches	X: Alpha-beta plaits	H: Protease propeptides/inhibitors	T: Protease propeptides/inhibitors	F: PK	ECOD (v294.1)
A	Pkinase, Kinase-like	e4lrjA1	A: a/b three-layered sandwiches	X: Alpha-beta plaits	H: Protease propeptides/inhibitors	T: Protease propeptides/inhibitors	F: Pkinase, Kinase-like	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	3.30.200.20	Alpha Beta	2-Layer Sandwich	Phosphorylase Kinase	domain 1	CATH (4.3.0)
B	1.10.510.10	Mainly Alpha	Orthogonal Bundle	Transferase(Phosphotransferase)	domain 1	CATH (4.3.0)
A	3.30.200.20	Alpha Beta	2-Layer Sandwich	Phosphorylase Kinase	domain 1	CATH (4.3.0)
A	1.10.510.10	Mainly Alpha	Orthogonal Bundle	Transferase(Phosphotransferase)	domain 1	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF22303	Protein kinase OspG, kinase domain (OspG_kinase)	Protein kinase OspG, kinase domain	This entry represents the kinase domain of protein kinase OspG which is involved in down-regulation of the host innate response induced by invasive bacteria [1-5]. OspG is a an effector kinase that binds host E2 ubiquitin-conjugating enzymes activate ...	This entry represents the kinase domain of protein kinase OspG which is involved in down-regulation of the host innate response induced by invasive bacteria [1-5]. OspG is a an effector kinase that binds host E2 ubiquitin-conjugating enzymes activated with ubiquitin, which enhances its kinase activity, playing a role to suppress the host inflammatory response during invasion and colonization [2,5].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	Effector NleH1	molecular function inhibitor activity molecular function regulator activity transcription regulator inhibitor activity cation binding ion binding binding metal ion binding small molecule binding	regulation of biological process regulation of cellular process phosphorylation negative regulation of metabolic process biological regulation negative regulation of biological process negative regulation of phosphate metabolic process negative regulation of phosphorus metabolic process negative regulation of cellular process phosphate-containing compound metabolic process metabolic process cellular process regulation of phosphorus metabolic process regulation of phosphorylation regulation of biological process regulation of cellular process phosphorylation negative regulation of metabolic process biological regulation negative regulation of biological process negative regulation of phosphate metabolic process negative regulation of phosphorus metabolic process negative regulation of cellular process phosphate-containing compound metabolic process metabolic process cellular process regulation of phosphorus metabolic process regulation of phosphorylation negative regulation of phosphorylation phosphorus metabolic process regulation of metabolic process symbiont-mediated perturbation of host defense response effector-mediated perturbation of host defenses by symbiont biological process involved in interspecies interaction between organisms response to stimulus response to other organism symbiont-mediated perturbation of host immune response effector-mediated suppression of host innate immune response symbiont-mediated response to host defenses response to external stimulus biological process involved in interaction with host response to biotic stimulus biological process involved in symbiotic interaction effector-mediated perturbation of host innate immune response by symbiont symbiont-mediated suppression of host immune response effector-mediated suppression of host defense response symbiont-mediated perturbation of host process symbiont-mediated suppression of host innate immune response effector-mediated perturbation of host process by symbiont symbiont-mediated perturbation of host innate immune response response to host response to external biotic stimulus modulation of process of another organism	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR054466	Kinase OspG, kinase domain	Domain
A, B	IPR011009	Protein kinase-like domain superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.