4LFD | pdb_00004lfd

Staphylococcus aureus sortase B-substrate complex

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	Sortase	8058634	4003242	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Sortase	8058635	3000481	SCOP2 (2022-06-29)
C [auth B]	SCOP2B Superfamily	Sortase	8058635	3000481	SCOP2B (2022-06-29)
E [auth C]	SCOP2B Superfamily	Sortase	8058635	3000481	SCOP2B (2022-06-29)
G [auth D]	SCOP2B Superfamily	Sortase	8058635	3000481	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Sortase	e4lfdA1	A: beta barrels	X: Sortase (From Topology)	H: Sortase (From Topology)	T: Sortase	F: Sortase	ECOD (1.6)
C [auth B]	Sortase	e4lfdB1	A: beta barrels	X: Sortase (From Topology)	H: Sortase (From Topology)	T: Sortase	F: Sortase	ECOD (1.6)
E [auth C]	Sortase	e4lfdC1	A: beta barrels	X: Sortase (From Topology)	H: Sortase (From Topology)	T: Sortase	F: Sortase	ECOD (1.6)
G [auth D]	Sortase	e4lfdD1	A: beta barrels	X: Sortase (From Topology)	H: Sortase (From Topology)	T: Sortase	F: Sortase	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	2.40.260.10	Mainly Beta	Beta Barrel	Sortase	Chain: A	CATH (4.3.0)
C [auth B]	2.40.260.10	Mainly Beta	Beta Barrel	Sortase	Chain: A	CATH (4.3.0)
E [auth C]	2.40.260.10	Mainly Beta	Beta Barrel	Sortase	Chain: A	CATH (4.3.0)
G [auth D]	2.40.260.10	Mainly Beta	Beta Barrel	Sortase	Chain: A	CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
B [auth E], D [auth F], F [auth G], H	(CBZ)NPQ(B27) PEPTIDE	-	-	-
A, C [auth B], E [auth C], G [auth D]	Sortase B	hydrolase activity catalytic activity	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, C [auth B], E [auth C], G [auth D]	IPR023365	Sortase domain superfamily	Homologous Superfamily
A, C [auth B], E [auth C], G [auth D]	IPR009835	Sortase B family	Family
A, C [auth B], E [auth C], G [auth D]	IPR015986	Sortase B, Firmicutes	Family
A, C [auth B], E [auth C], G [auth D]	IPR005754	Sortase family	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.