4LD7 | pdb_00004ld7

Crystal structure of AnaPT from Neosartorya fischeri

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B	SCOP2B Superfamily	Prenyltransferase-like	8053361	3001496	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Prenyltransferase-like	8053361	3001496	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	Prenyltransferase-like	8053361	3001496	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	Prenyltransferase-like	8053361	3001496	SCOP2B (2022-06-29)
H	SCOP2B Superfamily	Prenyltransferase-like	8053361	3001496	SCOP2B (2022-06-29)
I	SCOP2B Superfamily	Prenyltransferase-like	8053361	3001496	SCOP2B (2022-06-29)
K	SCOP2B Superfamily	Prenyltransferase-like	8053361	3001496	SCOP2B (2022-06-29)
L	SCOP2B Superfamily	Prenyltransferase-like	8053361	3001496	SCOP2B (2022-06-29)
M	SCOP2 Family	Dimethylallyl tryptophan synthase-like	8047201	4005502	SCOP2 (2022-06-29)
M	SCOP2 Superfamily	Prenyltransferase-like	8053361	3001496	SCOP2 (2022-06-29)
O	SCOP2B Superfamily	Prenyltransferase-like	8053361	3001496	SCOP2B (2022-06-29)
P	SCOP2B Superfamily	Prenyltransferase-like	8053361	3001496	SCOP2B (2022-06-29)
N	SCOP2B Superfamily	Prenyltransferase-like	8053361	3001496	SCOP2B (2022-06-29)
J	SCOP2B Superfamily	Prenyltransferase-like	8053361	3001496	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	Prenyltransferase-like	8053361	3001496	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Prenyltransferase-like	8053361	3001496	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Prenyltransferase-like	8053361	3001496	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	HTH_3	e4ld7B1	A: a/b three-layered sandwiches	X: dsRBD-like	H: Peptidyl-tRNA hydrolase domain-like	T: Peptidyl-tRNA hydrolase domain-like	F: HTH_3	ECOD (v294.1)
D	HTH_3	e4ld7D1	A: a/b three-layered sandwiches	X: dsRBD-like	H: Peptidyl-tRNA hydrolase domain-like	T: Peptidyl-tRNA hydrolase domain-like	F: HTH_3	ECOD (v294.1)
E	HTH_3	e4ld7E1	A: a/b three-layered sandwiches	X: dsRBD-like	H: Peptidyl-tRNA hydrolase domain-like	T: Peptidyl-tRNA hydrolase domain-like	F: HTH_3	ECOD (v294.1)
G	HTH_3	e4ld7G1	A: a/b three-layered sandwiches	X: dsRBD-like	H: Peptidyl-tRNA hydrolase domain-like	T: Peptidyl-tRNA hydrolase domain-like	F: HTH_3	ECOD (v294.1)
H	HTH_3	e4ld7H1	A: a/b three-layered sandwiches	X: dsRBD-like	H: Peptidyl-tRNA hydrolase domain-like	T: Peptidyl-tRNA hydrolase domain-like	F: HTH_3	ECOD (v294.1)
I	HTH_3	e4ld7I1	A: a/b three-layered sandwiches	X: dsRBD-like	H: Peptidyl-tRNA hydrolase domain-like	T: Peptidyl-tRNA hydrolase domain-like	F: HTH_3	ECOD (v294.1)
K	OMPdecase	e4ld7K1	A: a/b three-layered sandwiches	X: beta-Grasp	H: Ubiquitin-related	T: Ubiquitin-like	F: OMPdecase	ECOD (v294.1)
L	HTH_3	e4ld7L1	A: a/b three-layered sandwiches	X: dsRBD-like	H: Peptidyl-tRNA hydrolase domain-like	T: Peptidyl-tRNA hydrolase domain-like	F: HTH_3	ECOD (v294.1)
M	HTH_3	e4ld7M1	A: a/b three-layered sandwiches	X: dsRBD-like	H: Peptidyl-tRNA hydrolase domain-like	T: Peptidyl-tRNA hydrolase domain-like	F: HTH_3	ECOD (v294.1)
O	HTH_3	e4ld7O1	A: a/b three-layered sandwiches	X: dsRBD-like	H: Peptidyl-tRNA hydrolase domain-like	T: Peptidyl-tRNA hydrolase domain-like	F: HTH_3	ECOD (v294.1)
P	HTH_3	e4ld7P1	A: a/b three-layered sandwiches	X: dsRBD-like	H: Peptidyl-tRNA hydrolase domain-like	T: Peptidyl-tRNA hydrolase domain-like	F: HTH_3	ECOD (v294.1)
N	HTH_3	e4ld7N1	A: a/b three-layered sandwiches	X: dsRBD-like	H: Peptidyl-tRNA hydrolase domain-like	T: Peptidyl-tRNA hydrolase domain-like	F: HTH_3	ECOD (v294.1)
J	HTH_3	e4ld7J1	A: a/b three-layered sandwiches	X: dsRBD-like	H: Peptidyl-tRNA hydrolase domain-like	T: Peptidyl-tRNA hydrolase domain-like	F: HTH_3	ECOD (v294.1)
F	HTH_3	e4ld7F1	A: a/b three-layered sandwiches	X: dsRBD-like	H: Peptidyl-tRNA hydrolase domain-like	T: Peptidyl-tRNA hydrolase domain-like	F: HTH_3	ECOD (v294.1)
C	HTH_3	e4ld7C1	A: a/b three-layered sandwiches	X: dsRBD-like	H: Peptidyl-tRNA hydrolase domain-like	T: Peptidyl-tRNA hydrolase domain-like	F: HTH_3	ECOD (v294.1)
A	HTH_3	e4ld7A1	A: a/b three-layered sandwiches	X: dsRBD-like	H: Peptidyl-tRNA hydrolase domain-like	T: Peptidyl-tRNA hydrolase domain-like	F: HTH_3	ECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P	PF11991	Tryptophan dimethylallyltransferase (Trp_DMAT)	Tryptophan dimethylallyltransferase	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P	Dimethylallyl tryptophan synthase	transferase activity transferase activity, transferring alkyl or aryl (other than methyl) groups catalytic activity	alkaloid metabolic process metabolic process cellular process	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P	IPR033964	Aromatic prenyltransferase	Family
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P	IPR012148	Aromatic prenyltransferase DMATS-type, fungi	Family
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P	IPR017795	Aromatic prenyltransferase, NscD-like	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.