Crystal structure of AF1868: Cmr1 subunit of the Cmr RNA silencing complex
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| B | SCOP2 Family | RAMP-like | 8044859 | 4004180 | SCOP2 (2022-06-29) |
| B | SCOP2 Superfamily | CRISPR-associated proteins | 8052159 | 3001554 | SCOP2 (2022-06-29) |
| B | SCOP2 Superfamily | CRISPR-associated proteins | 8052160 | 3001554 | SCOP2 (2022-06-29) |
| A | SCOP2B Superfamily | CRISPR-associated proteins | 8052159 | 3001554 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | Glyoxalase | e4l6uB2 | A: a/b three-layered sandwiches | X: Fusion glycoprotein F2 | H: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase | T: MoeA-I/Ornithine decarboxylase-C/Reverse ferredoxin-like domain in RNA-polymerase | F: Glyoxalase | ECOD (v294.1) |
| A | RAMPs | e4l6uA1 | A: a/b three-layered sandwiches | X: CRISPR-associated endonuclease Cas9 C-terminal domain | H: RIFT-related | T: Type II restriction endonuclease effector domain | F: RAMPs | ECOD (v294.1) |
| A | B3 | e4l6uA2 | A: a/b three-layered sandwiches | X: CRISPR-associated endonuclease Cas9 C-terminal domain | H: RIFT-related | T: Type II restriction endonuclease effector domain | F: B3 | ECOD (v294.1) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF22407 | Cmr1, C-terminal domain (Cmr1_C) | Cmr1, C-terminal domain | This entry represents the C-terminal RRM domain of CRISPR system Cmr subunit Cmr1 from Archaeoglobus fulgidus [1]. | Domain | |
| PF03787 | RAMP superfamily (RAMPs) | RAMP superfamily | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Putative uncharacterized protein | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR055061 | Cmr1, C-terminal domain | Domain | |
| IPR007522 | CRISPR-associated protein TM1795 | Family | |
| IPR005537 | CRISPR type III-associated protein | Domain |














